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scnpilot_p_inoc_scaffold_3221

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_3221_1
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..145
-----------------
DNA (144bp)
protein (48aa)
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158};; Pantoate--beta-alanine ligase {ECO:0000256|HAMAP-
scnpilot_p_inoc_scaffold_3221_2
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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363..653
-----------------
DNA (291bp)
protein (97aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RGC0_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB78283.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
hypothetical protein
scnpilot_p_inoc_scaffold_3221_3
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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650..1015
-----------------
DNA (366bp)
protein (122aa)
Chemotaxis regulator-transmits chemoreceptor signals to flagelllar motor components CheY n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RGB9_PELHB
Chemotaxis protein CheY {ECO:0000313|EMBL:KKB07617.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY
scnpilot_p_inoc_scaffold_3221_4
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1044..3380
-----------------
DNA (2337bp)
protein (779aa)
Signal transduction histidine kinase CheA n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RGB8_PELHB rbh
Uncharacterized protein {ECO:0000313|EMBL:KKB07616.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
signal transduction histidine kinase CheA
scnpilot_p_inoc_scaffold_3221_5
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3454..3954
-----------------
DNA (501bp)
protein (167aa)
Positive regulator of CheA protein activity (CheW) n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RGB7_PELHB
Chemotaxis protein CheW {ECO:0000313|EMBL:KKB07615.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
positive regulator of CheA protein activity (CheW)
scnpilot_p_inoc_scaffold_3221_6
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4146..5237)
-----------------
DNA (1092bp)
protein (364aa)
RecD-like DNA helicase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R8Q6_PELHB rbh
ATP-binding protein {ECO:0000313|EMBL:KKB07630.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
recombinase D
scnpilot_p_inoc_scaffold_3221_7
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5237..5920)
-----------------
DNA (684bp)
protein (228aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002F9B36D rbh
Uncharacterized protein {ECO:0000313|EMBL:KKB84355.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;
fumarylacetoacetate hydroxylase
scnpilot_p_inoc_scaffold_3221_8
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5913..6974)
-----------------
DNA (1062bp)
protein (354aa)
Aldo/keto reductase n=1 Tax=Actinoplanes sp. N902-109 RepID=R4LIJ3_9ACTO rbh
Aldo/keto reductase {ECO:0000313|EMBL:KFL29950.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
aldo/keto reductase
scnpilot_p_inoc_scaffold_3221_9
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7107..7793
-----------------
DNA (687bp)
protein (229aa)
Uncharacterized protein n=1 Tax=Manganese-oxidizing bacterium (strain SI85-9A1) RepID=Q1YMP9_MOBAS
Uncharacterized protein {ECO:0000313|EMBL:KKB78270.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
scnpilot_p_inoc_scaffold_3221_10
Gloeobacter kilaueensis, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

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7802..8167
-----------------
DNA (366bp)
protein (122aa)
Uncharacterized protein n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QC35_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGY56378.1}; TaxID=1183438 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter kilaueensis JS1.;"
scnpilot_p_inoc_scaffold_3221_11
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8192..9058
-----------------
DNA (867bp)
protein (289aa)
Threonine/homoserine transporter RhtA n=1 Tax=Pseudomonas alcaligenes NBRC 14159 RepID=U3AVJ9_PSEAC
Transporter {ECO:0000313|EMBL:KKB08281.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
scnpilot_p_inoc_scaffold_3221_12
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9102..9500
-----------------
DNA (399bp)
protein (133aa)
Uncharacterized protein n=1 Tax=Phyllobacterium sp. YR531 RepID=J3CHR2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KKB07634.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
scnpilot_p_inoc_scaffold_3221_13
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9582..10229
-----------------
DNA (648bp)
protein (216aa)
Lysine exporter protein (LYSE/YGGA) n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6Y0_PELHB rbh
Threonine transporter RhtB {ECO:0000313|EMBL:KKB07774.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;
lysine exporter protein LysE/YggA
Displaying 13 items

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