ggKbase home page

scnpilot_p_inoc_scaffold_3232

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_3232_1
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..291)
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Meganema perideroedes RepID=UPI00035DF962
Uncharacterized protein {ECO:0000313|EMBL:KFC61266.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
scnpilot_p_inoc_scaffold_3232_2
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(458..1192)
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9X2_PELHB rbh
Cytoplasmic protein {ECO:0000313|EMBL:KKB07483.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
scnpilot_p_inoc_scaffold_3232_3
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1308..2330)
DNA (1023bp) protein (341aa)
Quinone oxidoreductase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9X0_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB07482.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
quinone oxidoreductase
scnpilot_p_inoc_scaffold_3232_4
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2437..2619
DNA (183bp) protein (61aa)
hypothetical protein n=1 Tax=Methylosinus sp. LW4 RepID=UPI0003689FE8
Uncharacterized protein {ECO:0000313|EMBL:KKB76056.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
hypothetical protein
scnpilot_p_inoc_scaffold_3232_5
unknown

Not on your lists

2727..2945
DNA (219bp) protein (73aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_3232_6
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3259..3783
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9W5_PELHB
Regulator of CtrA degradation {ECO:0000313|EMBL:KKB07480.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensi
hypothetical protein
scnpilot_p_inoc_scaffold_3232_7
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3790..4110)
DNA (321bp) protein (107aa)
UPI0003CEF48B related cluster n=1 Tax=unknown RepID=UPI0003CEF48B
UPF0060 membrane protein VW29_01865 {ECO:0000256|HAMAP-Rule:MF_00010}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia
hypothetical protein
scnpilot_p_inoc_scaffold_3232_8
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(4177..4398)
DNA (222bp) protein (74aa)
50S ribosomal protein L31 n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002E15A21
50S ribosomal protein L31 {ECO:0000256|HAMAP-Rule:MF_00501, ECO:0000256|SAAS:SAAS00004482}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia
rpmE; 50S ribosomal protein L31
scnpilot_p_inoc_scaffold_3232_9
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4612..6429
DNA (1818bp) protein (606aa)
Lipid A export ATP-binding/permease protein MsbA n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9W3_PELHB rbh
ABC transporter {ECO:0000313|EMBL:KKB76052.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
lipid A export ATP-binding/permease protein MsbA
scnpilot_p_inoc_scaffold_3232_10
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6452..7165)
DNA (714bp) protein (238aa)
Thiamin pyrophosphokinase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R953_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKC34147.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
thiamin pyrophosphokinase
scnpilot_p_inoc_scaffold_3232_11
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7356..8363
DNA (1008bp) protein (336aa)
Thiamin ABC transporter, substrate-binding component n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R954_PELHB rbh
Thiamine ABC transporter substrate-binding protein {ECO:0000313|EMBL:KKB12574.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source
thiamin ABC transporter, substrate-binding component rbh
scnpilot_p_inoc_scaffold_3232_12
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8461..9867
DNA (1407bp) protein (469aa)
Thiamin ABC transporter, transmembrane component n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R955_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB07478.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
thiamin ABC transporter, transmembrane component
Displaying 12 items

View Taxonomy