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scnpilot_p_inoc_scaffold_3353

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_3353_1
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..193)
DNA (192bp) protein (64aa)
LysR family transcriptional regulator n=1 Tax=Ketogulonicigenium vulgare (strain WSH-001) RepID=F9Y5L8_KETVW
Transcriptional regulator, LysR family {ECO:0000313|EMBL:KFC62462.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia s
LysR family transcriptional regulator
scnpilot_p_inoc_scaffold_3353_2
Devosia epidermidihirudinis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

289..1785
DNA (1497bp) protein (499aa)
iolA; methylmalonate-semialdehyde dehydrogenase (Acylating) protein (EC:1.2.1.27)
Methylmalonate-semialdehyde dehydrogenase n=1 Tax=Ketogulonicigenium vulgare (strain Y25) RepID=E3F1P2_KETVY rbh
Methylmalonate-semialdehyde dehydrogenase {ECO:0000313|EMBL:KKC41396.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosi
scnpilot_p_inoc_scaffold_3353_3
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2097..2618)
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9S0_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB77819.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
hypothetical protein
scnpilot_p_inoc_scaffold_3353_4
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2839..3606
DNA (768bp) protein (256aa)
ABC transporter, ATP-binding protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RTQ0_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KKB77818.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
putative ABC transporter, ATPase component
scnpilot_p_inoc_scaffold_3353_5
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3606..6161
DNA (2556bp) protein (852aa)
Uncharacterized protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HSY1_PARL1
Uncharacterized protein {ECO:0000313|EMBL:KKB77817.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
hypothetical protein
scnpilot_p_inoc_scaffold_3353_6
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6274..6855
DNA (582bp) protein (194aa)
Lytic transglycosylase, catalytic n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HPH5_9RHIZ
Transglycosylase SLT domain protein {ECO:0000313|EMBL:KFC64433.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp.
lytic transglycosylase catalytic subunit
scnpilot_p_inoc_scaffold_3353_7
Devosia epidermidihirudinis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6911..7126)
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RBV6_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKC37946.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudi
hypothetical protein
scnpilot_p_inoc_scaffold_3353_8
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7636..8682
DNA (1047bp) protein (349aa)
HTH-type transcriptional regulator AglR n=1 Tax=Shinella zoogloeoides DD12 RepID=V5C5M4_9RHIZ
LacI family transcriptional regulator {ECO:0000313|EMBL:KKB77792.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sol
aglR; HTH-type transcriptional regulator AglR
scnpilot_p_inoc_scaffold_3353_9
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8703..9935)
DNA (1233bp) protein (411aa)
ABC transporter, ATP-binding protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RG57_PELHB
Elongation factor 3 {ECO:0000313|EMBL:KKB08379.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
ABC transporter ATP-binding protein
scnpilot_p_inoc_scaffold_3353_10
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9898..10476)
DNA (579bp) protein (193aa)
ABC transporter with duplicated ATPase domains n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TJJ6_9BRAD
Elongation factor 3 {ECO:0000313|EMBL:KKB08379.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
ABC transporter
scnpilot_p_inoc_scaffold_3353_11
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10733..11209)
DNA (477bp) protein (159aa)
Rrf2 family protein, putative transcriptional regulator n=1 Tax=Phyllobacterium sp. YR531 RepID=J2VXF7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KKB08378.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
rirA; iron-responsive transcriptional regulator
scnpilot_p_inoc_scaffold_3353_12
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11407..11703
DNA (297bp) protein (99aa)
Integration host factor subunit alpha n=3 Tax=Labrenzia RepID=U7FIT6_9RHOB
Integration host factor subunit alpha {ECO:0000313|EMBL:KFC61351.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp
ihfA; integration host factor subunit alpha
scnpilot_p_inoc_scaffold_3353_13
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12021..13013)
DNA (993bp) protein (331aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R992_PELHB rbh
3-beta hydroxysteroid dehydrogenase {ECO:0000313|EMBL:KKB07899.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinh
NAD-dependent epimerase/dehydratase
Displaying 13 items

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