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scnpilot_p_inoc_scaffold_3454

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_3454_1
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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289..756
DNA (468bp) protein (156aa)
Transcriptional repressor NrdR n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R642_PELHB
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; De
ribonucleotide reductase transcriptional regulator NrdR
scnpilot_p_inoc_scaffold_3454_2
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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872..1345
DNA (474bp) protein (158aa)
6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6G4_PELHB
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00
6,7-dimethyl-8-ribityllumazine synthase
scnpilot_p_inoc_scaffold_3454_3
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1346..1837
DNA (492bp) protein (164aa)
N utilization substance protein B homolog n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6G5_PELHB
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=1502724 species="Bacteria; Prot
transcription termination protein NusB
scnpilot_p_inoc_scaffold_3454_4
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2040..2477)
DNA (438bp) protein (146aa)
SmpA/OmlA n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6G7_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB09235.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
SmpA/OmlA protein
scnpilot_p_inoc_scaffold_3454_5
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2644..3171
DNA (528bp) protein (176aa)
Ubiquinol-cytochrome C chaperone n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6G8_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB10263.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
ubiquinol-cytochrome C chaperone
scnpilot_p_inoc_scaffold_3454_6
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3168..3716
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6G9_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB09236.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
scnpilot_p_inoc_scaffold_3454_7
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3800..4870
DNA (1071bp) protein (357aa)
Phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054336}; EC=2.3.1.n2 {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054327};; Acyl-ACP phosphotransacylase
Phosphate acyltransferase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6H0_PELHB rbh
phosphate:acyl-ACP acyltransferase PlsX
scnpilot_p_inoc_scaffold_3454_8
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4867..5844
DNA (978bp) protein (326aa)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6H1_PELHB rbh
3-oxoacyl-ACP synthase
scnpilot_p_inoc_scaffold_3454_9
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6075..6386
DNA (312bp) protein (104aa)
Integration host factor subunit alpha n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6H2_PELHB
Integration host factor subunit alpha {ECO:0000256|HAMAP-Rule:MF_00380, ECO:0000256|RuleBase:RU004485}; Short=IHF-alpha {ECO:0000256|HAMAP-Rule:MF_00380};; TaxID=429727 species="Bacteria; Proteobacter
integration host factor alpha subunit
scnpilot_p_inoc_scaffold_3454_10
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6414..7004
DNA (591bp) protein (197aa)
Transcriptional regulator, MerR family n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6H3_PELHB
MerR family transcriptional regulator {ECO:0000313|EMBL:KKB81068.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sol
transcriptional regulator, MerR family
scnpilot_p_inoc_scaffold_3454_11
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7747..8697
DNA (951bp) protein (317aa)
sugar ABC transporter substrate-binding protein n=1 Tax=Pannonibacter phragmitetus RepID=UPI0003776E9F rbh
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:KFL31765.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="De
periplasmic-binding protein/LacI transcriptional regulator
scnpilot_p_inoc_scaffold_3454_12
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8784..10664
DNA (1881bp) protein (627aa)
Inner-membrane translocator n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NN34_9RHOB
ATPase {ECO:0000313|EMBL:KKB09776.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
inner-membrane translocator
scnpilot_p_inoc_scaffold_3454_13
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10730..11734
DNA (1005bp) protein (335aa)
idhA; myo-inositol 2-dehydrogenase (EC:1.1.1.18)
inositol 2-dehydrogenase n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI000372E28F rbh
Myo-inositol 2-dehydrogenase {ECO:0000313|EMBL:KFC71053.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
scnpilot_p_inoc_scaffold_3454_14
Rhizobium grahamii, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11882..12010)
DNA (129bp) protein (43aa)
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI0003743711
Myo-inositol catabolism protein {ECO:0000313|EMBL:EPE99088.1}; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.
hypothetical protein
Displaying 14 items

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