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scnpilot_p_inoc_scaffold_3532

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_3532_1
bacterium YEK0313, Bacteria

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1..507
DNA (507bp) protein (169aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036AACCB
Arabinose 5-phosphate isomerase KdsD {ECO:0000313|EMBL:CEJ15117.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
sugar isomerase
scnpilot_p_inoc_scaffold_3532_2
Martelella endophytica, Martelella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(527..967)
DNA (441bp) protein (147aa)
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI000367223B
membrane protein
Membrane protein {ECO:0000313|EMBL:AJY44564.1}; TaxID=1486262 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Martelella.;" source="Martelella endophytica.;"
scnpilot_p_inoc_scaffold_3532_3
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(964..1968)
DNA (1005bp) protein (335aa)
Putative stomatin/prohibitin-family membrane protease subunit YbbK n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCA3_PELHB rbh
Membrane protein {ECO:0000313|EMBL:KKB76938.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
putative stomatin/prohibitin-family membrane protease subunit YbbK
scnpilot_p_inoc_scaffold_3532_4
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2079..2915)
DNA (837bp) protein (279aa)
Lysozyme {ECO:0000256|RuleBase:RU361176}; EC=3.2.1.17 {ECO:0000256|RuleBase:RU361176};; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" s
Phage lysin, glycosyl hydrolase, family 25 n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R8F9_PELHB rbh
phage lysin, glycosyl hydrolase, family 25
scnpilot_p_inoc_scaffold_3532_5
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3075..4628
DNA (1554bp) protein (518aa)
Mg(2+) chelatase family protein / ComM-related protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R8G1_PELHB rbh
ATPase AAA {ECO:0000313|EMBL:KKB07857.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
Mg(2+) chelatase family protein / ComM-related protein
scnpilot_p_inoc_scaffold_3532_6
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4674..7097)
DNA (2424bp) protein (808aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tR
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RBQ4_PELHB rbh
phenylalanyl-tRNA synthetase beta chain
scnpilot_p_inoc_scaffold_3532_7
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7109..8149)
DNA (1041bp) protein (347aa)
Uncharacterized protein n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3JAA9_FRASU
Uncharacterized protein {ECO:0000313|EMBL:KKB08328.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
scnpilot_p_inoc_scaffold_3532_8
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8146..8409)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RBQ5_PELHB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEQ53696.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacterium
scnpilot_p_inoc_scaffold_3532_9
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8628..9608)
DNA (981bp) protein (327aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-t
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RBQ6_PELHB
phenylalanyl-tRNA synthetase alpha chain
scnpilot_p_inoc_scaffold_3532_10
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(9906..10307)
DNA (402bp) protein (134aa)
50S ribosomal protein L20 n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RBQ7_PELHB
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia
50S ribosomal protein L20
scnpilot_p_inoc_scaffold_3532_11
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(10327..10527)
DNA (201bp) protein (67aa)
50S ribosomal protein L35 n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RBQ8_PELHB
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia
50S ribosomal protein L35
scnpilot_p_inoc_scaffold_3532_12
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10816..11127
DNA (312bp) protein (104aa)
Uncharacterized protein {ECO:0000313|EMBL:KKB78743.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
scnpilot_p_inoc_scaffold_3532_13
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11177..12025)
DNA (849bp) protein (283aa)
Glycosyl transferase, group 2 family protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9B4_PELHB
Glycosyl transferase, group 2 family protein {ECO:0000313|EMBL:KFC68744.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Dev
glycosyl transferase family protein
scnpilot_p_inoc_scaffold_3532_14
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12162..12581
DNA (420bp) protein (140aa)
Small heat shock protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9B3_PELHB
Heat-shock protein Hsp20 {ECO:0000313|EMBL:KKB08331.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
small heat shock protein
scnpilot_p_inoc_scaffold_3532_15
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12606..12890
DNA (285bp) protein (95aa)
Uncharacterized protein {ECO:0000313|EMBL:KKB07880.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
scnpilot_p_inoc_scaffold_3532_16
Devosia insulae, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12970..13437)
DNA (468bp) protein (156aa)
PTS system nitrogen-specific IIA component, PtsN n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9A9_PELHB
Nitrogen regulatory protein {ECO:0000313|EMBL:KKB81887.1}; TaxID=1116389 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia insulae DS-5
PTS system nitrogen-specific IIA component, PtsN
scnpilot_p_inoc_scaffold_3532_17
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13486..14064)
DNA (579bp) protein (193aa)
Ribosomal subunit interface protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9A8_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB07873.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
ribosomal subunit interface protein
scnpilot_p_inoc_scaffold_3532_18
unknown

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14300..14623
DNA (324bp) protein (108aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_3532_19
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(14699..15265)
DNA (567bp) protein (189aa)
NifU protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R8I1_PELHB rbh
Iron transporter {ECO:0000313|EMBL:KKB07906.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
NifU protein
scnpilot_p_inoc_scaffold_3532_20
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15569..17182)
DNA (1614bp) protein (538aa)
Beta-xylosidase n=1 Tax=Verticillium alfalfae (strain VaMs.102 / ATCC MYA-4576 / FGSC 10136) RepID=C9SRQ6_VERA1 rbh
Beta-xylosidase {ECO:0000313|EMBL:KKB07865.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
beta-xylosidase
Displaying 20 items

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