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scnpilot_p_inoc_scaffold_6676

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_6676_1
unknown

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comp(1..66)
DNA (66bp) protein (22aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_6676_2
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(59..370)
DNA (312bp) protein (104aa)
50S ribosomal protein L24 n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RC28_PELHB
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensi
50S ribosomal protein L24
scnpilot_p_inoc_scaffold_6676_3
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(370..738)
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RC29_PELHB
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia
50S ribosomal protein L14
scnpilot_p_inoc_scaffold_6676_4
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(804..1037)
DNA (234bp) protein (78aa)
30S ribosomal protein S17 n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RC30_PELHB
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensi
30S ribosomal protein S17
scnpilot_p_inoc_scaffold_6676_5
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(1050..1244)
DNA (195bp) protein (65aa)
50S ribosomal protein L29 n=1 Tax=Mesorhizobium thiogangeticum RepID=L0MXW6_9RHIZ
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensi
50S ribosomal protein L29
scnpilot_p_inoc_scaffold_6676_6
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(1256..1669)
DNA (414bp) protein (138aa)
50S ribosomal protein L16 n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RC32_PELHB
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia
50S ribosomal protein L16
scnpilot_p_inoc_scaffold_6676_7
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(1685..2422)
DNA (738bp) protein (246aa)
30S ribosomal protein S3 n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RC33_PELHB rbh
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis
30S ribosomal protein S3
scnpilot_p_inoc_scaffold_6676_8
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(2422..2802)
DNA (381bp) protein (127aa)
50S ribosomal protein L22 n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RC34_PELHB
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia
50S ribosomal protein L22
scnpilot_p_inoc_scaffold_6676_9
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(2804..3082)
DNA (279bp) protein (93aa)
30S ribosomal protein S19 n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A957_STAND
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
30S ribosomal protein S19
scnpilot_p_inoc_scaffold_6676_10
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(3086..3925)
DNA (840bp) protein (280aa)
50S ribosomal protein L2 n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RC36_PELHB rbh
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;
50S ribosomal protein L2
scnpilot_p_inoc_scaffold_6676_11
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(3944..4237)
DNA (294bp) protein (98aa)
50S ribosomal protein L23 n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RC37_PELHB
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensi
50S ribosomal protein L23
scnpilot_p_inoc_scaffold_6676_12
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(4234..4854)
DNA (621bp) protein (207aa)
50S ribosomal protein L4 n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RC38_PELHB
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
50S ribosomal protein L4
scnpilot_p_inoc_scaffold_6676_13
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(4855..5550)
DNA (696bp) protein (232aa)
50S ribosomal protein L3 n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RC39_PELHB rbh
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.
50S ribosomal protein L3
scnpilot_p_inoc_scaffold_6676_14
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(5635..5943)
DNA (309bp) protein (103aa)
30S ribosomal protein S10 n=2 Tax=Oligotropha carboxidovorans RepID=RS10_OLICO
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.
rpsJ; 30S ribosomal protein S10
scnpilot_p_inoc_scaffold_6676_15
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6011..6223)
DNA (213bp) protein (71aa)
Elongation factor Tu n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=EFTU_AZOC5
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacter
elongation factor Tu
Displaying 15 items

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