ggKbase home page

scnpilot_p_inoc_scaffold_1154

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1154_1
unknown

Not on your lists

1..192
DNA (192bp) protein (64aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1154_2

Not on your lists

189..1325
DNA (1137bp) protein (379aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000363D2E7
Uncharacterized protein {ECO:0000313|EMBL:KKM75064.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
scnpilot_p_inoc_scaffold_1154_3
unknown

Not on your lists

1322..1561
DNA (240bp) protein (80aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1154_4
unknown

Not on your lists

1558..2442
DNA (885bp) protein (295aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1154_5
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2439..5078
DNA (2640bp) protein (880aa)
DNA methylase n=1 Tax=Rhizobium phage RR1-A RepID=R9TRS8_9CAUD rbh
DNA methylase N-4 {ECO:0000313|EMBL:KFL27045.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
DNA methylase N-4/N-6 domain-containing protein
scnpilot_p_inoc_scaffold_1154_6
unknown

Not on your lists

5075..5386
DNA (312bp) protein (104aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1154_7
unknown

Not on your lists

5395..5574
DNA (180bp) protein (60aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1154_8
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5556..5789
DNA (234bp) protein (78aa)
Uncharacterized protein {ECO:0000313|EMBL:KKB81032.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
scnpilot_p_inoc_scaffold_1154_9
unknown

Not on your lists

5786..5965
DNA (180bp) protein (60aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1154_10
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5965..7143
DNA (1179bp) protein (393aa)
Phage P4 alpha zn-binding domain-containing protein n=5 Tax=root RepID=H6WBR4_9VIRU
Uncharacterized protein {ECO:0000313|EMBL:CDP51975.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1154_11
unknown

Not on your lists

comp(7146..7751)
DNA (606bp) protein (202aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1154_12
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7897..9741
DNA (1845bp) protein (615aa)
Phage/plasmid primase, P4 family protein n=1 Tax=Methylobacterium mesophilicum SR1.6/6 RepID=M7YSE7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFL27043.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
phage / plasmid primase P4
scnpilot_p_inoc_scaffold_1154_13
Phaeospirillum molischianum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10148..10750
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Phaeospirillum molischianum DSM 120 RepID=H8FUY3_PHAMO
Uncharacterized protein {ECO:0000313|EMBL:CCG42171.1}; TaxID=1150626 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeospirill
scnpilot_p_inoc_scaffold_1154_14
Nitratireductor basaltis, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10827..11204
DNA (378bp) protein (126aa)
Putative phage-related holin protein n=1 Tax=Sinorhizobium meliloti (strain SM11) RepID=F7X3F3_SINMM
HNH endonuclease {ECO:0000313|EMBL:KFB10347.1}; TaxID=472175 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor basalti
putative phage-related holin protein
scnpilot_p_inoc_scaffold_1154_15
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11289..11762
DNA (474bp) protein (158aa)
UPI0003D63DD4 related cluster n=1 Tax=unknown RepID=UPI0003D63DD4
Uncharacterized protein {ECO:0000313|EMBL:ETI62983.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp.
hypothetical protein
scnpilot_p_inoc_scaffold_1154_16
Labrenzia alexandrii, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11762..13477
DNA (1716bp) protein (572aa)
terminase n=1 Tax=Sphingomonas sp. KC8 RepID=UPI00024897BB rbh
Phage terminase, large subunit, putative {ECO:0000313|EMBL:EEE45968.1}; TaxID=244592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Lab
Phage terminase large subunit
scnpilot_p_inoc_scaffold_1154_17
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13474..14775
DNA (1302bp) protein (434aa)
Phage portal protein, HK97 family n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3I169_9BRAD rbh
Portal protein, HK97 family rbh
Portal protein, HK97 family {ECO:0000313|EMBL:CDN52526.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" s
scnpilot_p_inoc_scaffold_1154_18
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14735..15466
DNA (732bp) protein (244aa)
Protease subunit of ATP-dependent protease n=1 Tax=Bradyrhizobium sp. YR681 RepID=J2WGS4_9BRAD
clpP; ATP-dependent Clp protease, proteolytic subunit ClpP
ATP-dependent Clp protease, proteolytic subunit ClpP {ECO:0000313|EMBL:CDN52527.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium
scnpilot_p_inoc_scaffold_1154_19
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15566..17050
DNA (1485bp) protein (495aa)
Putative major capsid protein n=1 Tax=Desulfovibrio gigas DSM 1382 = ATCC 19364 RepID=T2GD29_DESGI rbh
HK97 family prophage LambdaSa04
HK97 family prophage LambdaSa04 {ECO:0000313|EMBL:CDN52528.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.
scnpilot_p_inoc_scaffold_1154_20

Not on your lists

17126..17638
DNA (513bp) protein (171aa)
hypothetical protein n=1 Tax=Schlesneria paludicola RepID=UPI00029AB8E8
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KKL71488.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
scnpilot_p_inoc_scaffold_1154_21
unknown

Not on your lists

17693..18187
DNA (495bp) protein (165aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1154_22
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18190..18792
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Novosphingobium sp. AP12 RepID=J2ZT30_9SPHN
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETR75910.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
scnpilot_p_inoc_scaffold_1154_23
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18789..19115
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IIN1_METNO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL59908.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacteri
scnpilot_p_inoc_scaffold_1154_24
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19112..19711
DNA (600bp) protein (200aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI00035F6869
Uncharacterized protein {ECO:0000313|EMBL:ETR75066.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1154_25
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19714..20124
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IIM9_METNO
Uncharacterized protein {ECO:0000313|EMBL:ETR75067.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1154_26
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20157..21083
DNA (927bp) protein (309aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI000377FE7D rbh
Phage tail protein {ECO:0000313|EMBL:ETR75068.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein rbh
scnpilot_p_inoc_scaffold_1154_27
unknown

Not on your lists

21089..21304
DNA (216bp) protein (72aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1154_28
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21279..21737
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Methylopila sp. M107 RepID=UPI00036A9C4C
Uncharacterized protein {ECO:0000313|EMBL:ETR75069.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1154_29
Asticcacaulis sp. AC466, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21809..22039
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Asticcacaulis sp. AC466 RepID=V4P584_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:ESQ83256.1}; TaxID=1282362 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis s
hypothetical protein
scnpilot_p_inoc_scaffold_1154_30
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22067..26176
DNA (4110bp) protein (1370aa)
Uncharacterized protein n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5XS09_PARAH
Prophage tail length tape measure protein
Prophage tail length tape measure protein {ECO:0000313|EMBL:CDN52540.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neo
Displaying 30 items

View Taxonomy