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scnpilot_p_inoc_scaffold_1384

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1384_1
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3..143)
DNA (141bp) protein (47aa)
glycine cleavage system protein H; K02437 glycine cleavage system H protein id=12493031 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
glycine cleavage system protein H
Glycine cleavage system H protein {ECO:0000255|HAMAP-Rule:MF_00272}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="
scnpilot_p_inoc_scaffold_1384_2
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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235..1197
DNA (963bp) protein (321aa)
monooxygenase n=1 Tax=Burkholderia sp. JPY347 RepID=UPI000366F761
Monooxygenase {ECO:0000313|EMBL:KFL31344.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family protein
scnpilot_p_inoc_scaffold_1384_3
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1265..1813
DNA (549bp) protein (183aa)
Acetyltransferase n=1 Tax=Rhizobium sp. IRBG74 RepID=U4PYZ5_9RHIZ
Acetyltransferase {ECO:0000313|EMBL:KKC31068.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
Acetyltransferase
scnpilot_p_inoc_scaffold_1384_4
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1909..3681
DNA (1773bp) protein (591aa)
ABC-type polar amino acid transport system, ATPase component n=1 Tax=Rhizobium sp. CF142 RepID=J1SK93_9RHIZ rbh
amino acid ABC transporter ATP-binding protein
ABC-type polar amino acid transport system, ATPase component {ECO:0000313|EMBL:EJJ25618.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/A
scnpilot_p_inoc_scaffold_1384_5
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3770..4702
DNA (933bp) protein (311aa)
ABC transporter substrate-binding protein n=1 Tax=Acidovorax radicis RepID=UPI00023754C0 rbh
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KKC31067.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia
ABC transporter substrate-binding protein
scnpilot_p_inoc_scaffold_1384_6
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4771..5802
DNA (1032bp) protein (344aa)
Oxidoreductase protein n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JJU5_AGRRK rbh
Oxidoreductase {ECO:0000313|EMBL:KFL31341.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
oxidoreductase
scnpilot_p_inoc_scaffold_1384_7
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5867..6790
DNA (924bp) protein (308aa)
Periplasmic component of amino acid ABC-type transporter/signal transduction system n=1 Tax=Rhizobium sp. CF142 RepID=J2KWR6_9RHIZ rbh
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KFL31340.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia
amino acid ABC transporter
scnpilot_p_inoc_scaffold_1384_8
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7170..7721)
DNA (552bp) protein (184aa)
Conserved protein of DIM6/NTAB family n=1 Tax=Phyllobacterium sp. YR531 RepID=J3HTB3_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KKC31064.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
putative flavin reductase
scnpilot_p_inoc_scaffold_1384_9
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7917..8291
DNA (375bp) protein (125aa)
Putative uncharacterized protein n=1 Tax=Agrobacterium sp. ATCC 31749 RepID=F5JH19_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFL29633.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1384_10
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8307..8987)
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K5M5_AGRVS rbh
ROK family protein {ECO:0000313|EMBL:KFL32407.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1384_11
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8977..10386)
DNA (1410bp) protein (470aa)
Glucose-6-phosphate 1-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497}; Short=G6PD {ECO:0000256|HAMAP-Rule:MF_00966};; EC=1.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0
Glucose-6-phosphate 1-dehydrogenase n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K5M6_AGRVS rbh
glucose-6-phosphate 1-dehydrogenase
scnpilot_p_inoc_scaffold_1384_12
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10389..11387)
DNA (999bp) protein (333aa)
6-phosphogluconate dehydrogenase n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K5M7_AGRVS rbh
6-phosphogluconate dehydrogenase {ECO:0000313|EMBL:KFL32409.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavi
6-phosphogluconate dehydrogenase-like protein rbh
scnpilot_p_inoc_scaffold_1384_13
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11408..13789)
DNA (2382bp) protein (794aa)
Glucan 1,4-alpha-glucosidase n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K5M8_AGRVS rbh
Cga {ECO:0000313|EMBL:KFL32410.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
glucan 1,4-alpha-glucosidase
scnpilot_p_inoc_scaffold_1384_14
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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14011..14769
DNA (759bp) protein (253aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; TaxID=429727 sp
Probable inorganic polyphosphate/ATP-NAD kinase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RDG2_PELHB rbh
NAD kinase
scnpilot_p_inoc_scaffold_1384_15
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(14773..15978)
DNA (1206bp) protein (402aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RDG3_PELHB rbh
Uncharacterized protein {ECO:0000313|EMBL:KFL30827.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1384_16
unknown

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comp(16056..16202)
DNA (147bp) protein (49aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1384_17
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(16305..17117)
DNA (813bp) protein (271aa)
Flagellar protein FlgJ (Peptidoglycan hydrolase) n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RDG4_PELHB
Flagellar protein FlgJ (Peptidoglycan hydrolase) {ECO:0000313|EMBL:KFC62702.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source=
flagellar protein FlgJ
scnpilot_p_inoc_scaffold_1384_18
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(17181..17777)
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RDG5_PELHB
NAD(P)H nitroreductase {ECO:0000313|EMBL:KKB79803.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1384_19
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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17968..18948
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RDG6_PELHB rbh
Uncharacterized protein {ECO:0000313|EMBL:KKB79804.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1384_20
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19130..20926
DNA (1797bp) protein (599aa)
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens str. Cherry 2E-2-2 RepID=M8AIJ1_RHIRD
Uncharacterized protein {ECO:0000313|EMBL:KFL30839.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1384_21
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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21074..21337
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RGW4_PELHB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEQ53117.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacterium
scnpilot_p_inoc_scaffold_1384_22
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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21337..21738
DNA (402bp) protein (134aa)
ATP synthase gamma chain n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z5R1_AZOL4
atpG1; ATP synthase, F1 sector subunit gamma
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=8627
Displaying 22 items

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