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scnpilot_p_inoc_scaffold_1744

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1744_1
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..699
DNA (699bp) protein (233aa)
Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3X952_RHIFR
Crp/Fnr family transcriptional regulator {ECO:0000313|EMBL:KKC31320.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia
Crp family transcriptional regulator
scnpilot_p_inoc_scaffold_1744_2
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(755..1210)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Manganese-oxidizing bacterium (strain SI85-9A1) RepID=Q1YL97_MOBAS
Uncharacterized protein {ECO:0000313|EMBL:KKC33060.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
Nuclear export factor GLE1
scnpilot_p_inoc_scaffold_1744_3
Ketogulonicigenium vulgare, Ketogulonicigenium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1229..2050)
DNA (822bp) protein (274aa)
Uncharacterized protein n=2 Tax=Ketogulonicigenium vulgare RepID=F9Y863_KETVW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO41499.1}; TaxID=880591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ketogulonicigenium.;" source="Ketogulonic
scnpilot_p_inoc_scaffold_1744_4
Ketogulonicigenium vulgare, Ketogulonicigenium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2047..3054)
DNA (1008bp) protein (336aa)
ccpR; di-heme cytochrome c peroxidase family protein (EC:1.11.1.5)
Di-haem cytochrome c peroxidase family protein {ECO:0000313|EMBL:AEM42350.1}; EC=1.11.1.5 {ECO:0000313|EMBL:AEM42350.1};; TaxID=759362 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobact
Di-haem cytochrome c peroxidase family protein n=1 Tax=Ketogulonicigenium vulgare (strain WSH-001) RepID=F9Y864_KETVW rbh
scnpilot_p_inoc_scaffold_1744_5
Roseobacter sp. GAI101, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3014..3205)
DNA (192bp) protein (64aa)
ccpR; di-heme cytochrome c peroxidase family protein (EC:1.11.1.5)
Di-heme Cytochrome-c peroxidase n=1 Tax=Roseobacter sp. GAI101 RepID=B7RIN9_9RHOB
Di-heme Cytochrome-c peroxidase {ECO:0000313|EMBL:EEB84415.1}; TaxID=391589 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacte
scnpilot_p_inoc_scaffold_1744_6
Ketogulonicigenium vulgare, Ketogulonicigenium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3209..4150)
DNA (942bp) protein (314aa)
Uncharacterized protein n=2 Tax=Ketogulonicigenium vulgare RepID=F9Y865_KETVW rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEM42351.1}; TaxID=759362 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ketogulonicigenium.;" source="Ketogulonic
scnpilot_p_inoc_scaffold_1744_7
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4165..4566)
DNA (402bp) protein (134aa)
PREDICTED: cytochrome c-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C16105
cy2; cytochrome c2
Cytochrome c2 {ECO:0000313|EMBL:EHH07075.1}; TaxID=1082932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacteriu
scnpilot_p_inoc_scaffold_1744_8
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4850..5203)
DNA (354bp) protein (118aa)
Uncharacterized protein {ECO:0000313|EMBL:CDP53820.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
scnpilot_p_inoc_scaffold_1744_9
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5649..5801
DNA (153bp) protein (51aa)
UPI0003CFB226 related cluster n=1 Tax=unknown RepID=UPI0003CFB226
Transposase {ECO:0000313|EMBL:KKC31741.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
transposase
scnpilot_p_inoc_scaffold_1744_10
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5831..6334
DNA (504bp) protein (168aa)
UPI0003CEBA82 related cluster n=1 Tax=unknown RepID=UPI0003CEBA82
Transposase {ECO:0000313|EMBL:KKC31742.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
transposase
scnpilot_p_inoc_scaffold_1744_11
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6343..6768
DNA (426bp) protein (142aa)
Transposase n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98A49_RHILO
transposase
Transposase {ECO:0000313|EMBL:ESY59971.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.
scnpilot_p_inoc_scaffold_1744_12
bacterium UASB270, Bacteria

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comp(6765..7040)
DNA (276bp) protein (92aa)
Adenine specific DNA methyltransferase n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X4Z1_FLAB3
Adenine specific DNA methyltransferase {ECO:0000313|EMBL:GAK59089.1}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
adenine-specific DNA methyltransferase
scnpilot_p_inoc_scaffold_1744_13
unknown

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comp(7187..7396)
DNA (210bp) protein (70aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1744_14
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7587..7793
DNA (207bp) protein (69aa)
cold-shock protein n=1 Tax=Kiloniella laminariae RepID=UPI0003760413
Cold-shock protein {ECO:0000313|EMBL:KFL26610.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
cold-shock DNA-binding protein family protein
scnpilot_p_inoc_scaffold_1744_15
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7871..8119
DNA (249bp) protein (83aa)
Hypothetical conserved protein n=1 Tax=Rhizobium etli (strain CFN 42 / ATCC 51251) RepID=Q2JZG6_RHIEC
Uncharacterized protein {ECO:0000313|EMBL:KFL26611.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1744_16
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8116..8358
DNA (243bp) protein (81aa)
Uncharacterized protein {ECO:0000313|EMBL:KFL26612.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
scnpilot_p_inoc_scaffold_1744_17
unknown

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8382..8555
DNA (174bp) protein (58aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1744_18
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8533..8799
DNA (267bp) protein (89aa)
Uncharacterized protein {ECO:0000313|EMBL:KFL26613.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
scnpilot_p_inoc_scaffold_1744_19
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8993..9226
DNA (234bp) protein (78aa)
Putative uncharacterized protein n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VIG9_CAUST
Uncharacterized protein {ECO:0000313|EMBL:KFL26614.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1744_20
unknown

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9343..9477
DNA (135bp) protein (45aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1744_21
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9474..17075
DNA (7602bp) protein (2534aa)
putative cyclic beta 1-2 glucan synthetase (EC:2.4.1.20)
Putative cyclic beta 1-2 glucan synthetase n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UHN1_RHIRD rbh
Glycosyl transferase {ECO:0000313|EMBL:KFL26615.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
Displaying 21 items

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