ggKbase home page

scnpilot_p_inoc_scaffold_1849

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1849_1
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..882
-----------------
DNA (882bp)
protein (294aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RF74_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB07770.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
putative diguanylate cyclase (GGDEF)/phosphodiesterase (EAL) with PAS domains
scnpilot_p_inoc_scaffold_1849_2
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

979..1524
-----------------
DNA (546bp)
protein (182aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6X7_PELHB
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensi
hypothetical protein
scnpilot_p_inoc_scaffold_1849_3
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1521..1904
-----------------
DNA (384bp)
protein (128aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6X6_PELHB
Glyoxalase {ECO:0000313|EMBL:KFL30187.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
glyoxalase/bleomycin resistance protein/dioxygenase
scnpilot_p_inoc_scaffold_1849_4
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1997..3346
-----------------
DNA (1350bp)
protein (450aa)
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7U500_RHIRD rbh
Uncharacterized protein {ECO:0000313|EMBL:EGP58911.1}; TaxID=1050720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Ag
Ser/Thr protein phosphatase
scnpilot_p_inoc_scaffold_1849_5
Devosia insulae, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3565..5379
-----------------
DNA (1815bp)
protein (605aa)
GTP-binding protein TypA/BipA n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6X5_PELHB rbh
GTP-binding protein TypA {ECO:0000313|EMBL:KKB82148.1}; TaxID=1116389 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia insulae DS-56.;
GTP-binding protein TypA
scnpilot_p_inoc_scaffold_1849_6
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5571..5930)
-----------------
DNA (360bp)
protein (120aa)
UPI0003CE2323 related cluster n=1 Tax=unknown RepID=UPI0003CE2323
Lactoylglutathione lyase {ECO:0000313|EMBL:KKB08306.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
glyoxalase/bleomycin resistance protein/dioxygenase family protein
scnpilot_p_inoc_scaffold_1849_7
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5952..6509)
-----------------
DNA (558bp)
protein (186aa)
riboflavin biosynthesis protein RibD n=1 Tax=Arthrobacter sp. 161MFSha2.1 RepID=UPI000362D3E4
Dihydrofolate reductase {ECO:0000313|EMBL:KFC68601.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
riboflavin biosynthesis protein RibD
scnpilot_p_inoc_scaffold_1849_8
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6808..8949)
-----------------
DNA (2142bp)
protein (714aa)
K(+)-insensitive pyrophosphate-energized proton pump {ECO:0000256|HAMAP-Rule:MF_01129}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_01129};; Membrane-bound proton-translocating pyrophosphatase {ECO:0000256|
K(+)-insensitive pyrophosphate-energized proton pump n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6W4_PELHB rbh
pyrophosphate-energized proton pump
scnpilot_p_inoc_scaffold_1849_9
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9137..9463)
-----------------
DNA (327bp)
protein (109aa)
UPF0235 protein RHSP_37470 n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UAT2_9RHIZ
UPF0235 protein VW29_07120 {ECO:0000256|HAMAP-Rule:MF_00634}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM
hypothetical protein
scnpilot_p_inoc_scaffold_1849_10
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9444..9746)
-----------------
DNA (303bp)
protein (101aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQK1_NITHX
Uncharacterized protein {ECO:0000313|EMBL:KKB07765.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1849_11
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10263..10871)
-----------------
DNA (609bp)
protein (203aa)
DedA family membrane-associated protein n=3 Tax=Azotobacter vinelandii RepID=C1DHZ0_AZOVD
Alkaline phosphatase {ECO:0000313|EMBL:KKB07766.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
DedA family membrane-associated protein
scnpilot_p_inoc_scaffold_1849_12
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10957..11850)
-----------------
DNA (894bp)
protein (298aa)
Uncharacterized protein n=1 Tax=Asticcacaulis benevestitus DSM 16100 = ATCC BAA-896 RepID=V4PBX2_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:KKB07762.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1849_13
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11902..13257)
-----------------
DNA (1356bp)
protein (452aa)
Coproporphyrinogen-III oxidase {ECO:0000256|PIRNR:PIRNR000167}; EC=1.3.99.22 {ECO:0000256|PIRNR:PIRNR000167};; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomi
Coproporphyrinogen-III oxidase n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QWL5_9RHIZ rbh
hemN; oxygen-independent coproporphyrinogen III oxidase
scnpilot_p_inoc_scaffold_1849_14
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13459..14277
-----------------
DNA (819bp)
protein (273aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725};; Ketopa
3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase id=1703608 bin=GWA2_Elusimicrobia_69_24 species=Syntrophothermus lipocalidus genus=Syntrophothermus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
scnpilot_p_inoc_scaffold_1849_15
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14277..15485
-----------------
DNA (1209bp)
protein (403aa)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase n=1 Tax=Thioflavicoccus mobilis 8321 RepID=L0GS58_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KKB07635.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase
scnpilot_p_inoc_scaffold_1849_16
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15482..16162
-----------------
DNA (681bp)
protein (227aa)
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158};; Pantoate--beta-alanine ligase {ECO:0000256|HAMAP-
panC; pantoate--beta-alanine ligase (EC:6.3.2.1)
pantoate--beta-alanine ligase n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001745EAD
Displaying 16 items

View Taxonomy