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scnpilot_p_inoc_scaffold_1928

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1928_1
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..395
DNA (393bp) protein (131aa)
Putative uncharacterized protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WX70_9SPHN
DNA, contig: SP630 {ECO:0000313|EMBL:GAN14171.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucim
Hypothetical protein
scnpilot_p_inoc_scaffold_1928_2
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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489..872
DNA (384bp) protein (128aa)
DNA-binding domain of ModE n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCV4_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB08262.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
DNA-binding domain of ModE
scnpilot_p_inoc_scaffold_1928_3
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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951..1679
DNA (729bp) protein (243aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002D3BF9C
Molybdate ABC transporter substrate-binding protein {ECO:0000313|EMBL:KFL29141.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source
molybdate ABC transporter substrate-binding protein
scnpilot_p_inoc_scaffold_1928_4
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1676..2359
DNA (684bp) protein (228aa)
molybdenum ABC transporter permease n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00030B6FB6
Molybdenum ABC transporter permease {ECO:0000313|EMBL:KFL29140.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia ribofl
molybdate ABC transporter permease
scnpilot_p_inoc_scaffold_1928_5
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2517..4004
DNA (1488bp) protein (496aa)
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI000360065A rbh
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KFL30486.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia
putative ABC-type dipeptide transport system, periplasmic component
scnpilot_p_inoc_scaffold_1928_6
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4219..4695)
DNA (477bp) protein (159aa)
Transcriptional regulator n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TUB2_TISMK
AsnC family transcriptional regulator {ECO:0000313|EMBL:KKB10210.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chi
transcriptional regulator
scnpilot_p_inoc_scaffold_1928_7
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4808..7180
DNA (2373bp) protein (791aa)
Pyruvate dehydrogenase E1 component {ECO:0000256|PIRNR:PIRNR000156}; EC=1.2.4.1 {ECO:0000256|PIRNR:PIRNR000156};; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyph
Pyruvate dehydrogenase (Acetyl-transferring) n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TUB1_TISMK rbh
aceE; pyruvate dehydrogenase
scnpilot_p_inoc_scaffold_1928_8
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7203..7670)
DNA (468bp) protein (156aa)
Proline dehydrogenase transcriptional activator n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98L64_RHILO
ArsR family transcriptional regulator {ECO:0000313|EMBL:KFL31575.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia ribo
proline dehydrogenase
scnpilot_p_inoc_scaffold_1928_9
Devosia insulae, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7791..11168
DNA (3378bp) protein (1126aa)
Pyrroline-5-carboxylate dehydrogenase {ECO:0000313|EMBL:KKB83016.1}; EC=1.2.1.88 {ECO:0000313|EMBL:KKB83016.1};; EC=1.5.5.2 {ECO:0000313|EMBL:KKB83016.1};; TaxID=1116389 species="Bacteria; Proteobacte
Proline dehydrogenase (Proline oxidase) / Delta-1-pyrroline-5-carboxylate dehydrogenase n=1 Tax=Thalassobacter arenae DSM 19593 RepID=S9S3R9_9RHOB
bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase
scnpilot_p_inoc_scaffold_1928_10
unknown

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11168..11425
DNA (258bp) protein (86aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1928_11
Devosia epidermidihirudinis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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11466..12566
DNA (1101bp) protein (367aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000376A932 rbh
Peptidase M24 {ECO:0000313|EMBL:KKC39735.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudinis.;"
peptidase M24
scnpilot_p_inoc_scaffold_1928_12
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12563..13336)
DNA (774bp) protein (258aa)
Transcriptional regulator, DeoR family n=1 Tax=Sinorhizobium medicae (strain WSM419) RepID=A6UDK2_SINMW
DeoR faimly transcriptional regulator {ECO:0000313|EMBL:KKB08121.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chi
DeoR family transcriptional regulator
scnpilot_p_inoc_scaffold_1928_13
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13416..14846)
DNA (1431bp) protein (477aa)
Uncharacterized protein n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JIZ1_AGRRK rbh
Microcystinase C {ECO:0000256|PIRNR:PIRNR012702}; Short=MlrC {ECO:0000256|PIRNR:PIRNR012702};; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devo
hypothetical protein
scnpilot_p_inoc_scaffold_1928_14
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(14862..15587)
DNA (726bp) protein (242aa)
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00037D7ACD
Membrane protein {ECO:0000313|EMBL:KKB77780.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
major facilitator superfamily MFS-1
Displaying 14 items

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