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scnpilot_p_inoc_scaffold_1976

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1976_1
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..392
DNA (390bp) protein (130aa)
Zinc uptake regulation protein ZUR n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4REH3_PELHB
Fur family transcriptional regulator {ECO:0000313|EMBL:KKB08725.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chin
zinc uptake regulation protein ZUR
scnpilot_p_inoc_scaffold_1976_2
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(518..1072)
DNA (555bp) protein (185aa)
Ribosomal RNA small subunit methyltransferase D n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RB06_PELHB
DNA methyltransferase {ECO:0000313|EMBL:KKB08723.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
ribosomal RNA small subunit methyltransferase D
scnpilot_p_inoc_scaffold_1976_3
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1339..3207)
DNA (1869bp) protein (623aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiacea
hypothetical protein n=1 Tax=Methylopila sp. M107 RepID=UPI0003620A7F
Pseudouridylate synthase
scnpilot_p_inoc_scaffold_1976_4
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3298..4002)
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RB04_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL30713.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1976_5
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4088..4654)
DNA (567bp) protein (189aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112541}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112508};; Prolipoprotein signal pep
Lipoprotein signal peptidase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RB03_PELHB
lipoprotein signal peptidase
scnpilot_p_inoc_scaffold_1976_6
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4822..7926)
DNA (3105bp) protein (1035aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0
Isoleucine--tRNA ligase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RB02_PELHB rbh
isoleucyl-tRNA synthetase
scnpilot_p_inoc_scaffold_1976_7
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8132..9103)
DNA (972bp) protein (324aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=429727 species="Bacteria; Proteobacter
Riboflavin kinase / FMN adenylyltransferase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RAF1_PELHB
riboflavin kinase/FMN adenylyltransferase
scnpilot_p_inoc_scaffold_1976_8
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9221..10087)
DNA (867bp) protein (289aa)
HAD superfamily protein involved in N-acetyl-glucosamine catabolism n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RAE9_PELHB rbh
Uncharacterized protein {ECO:0000313|EMBL:KKB08715.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
HAD superfamily protein involved in N-acetyl-glucosamine catabolism
scnpilot_p_inoc_scaffold_1976_9
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10486..11826)
DNA (1341bp) protein (447aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RAE8_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKC33193.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1976_10
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12044..13474
DNA (1431bp) protein (477aa)
LuxO repressor protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RAE6_PELHB rbh
Fis family transcriptional regulator {ECO:0000313|EMBL:KKB10173.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chin
LuxO repressor protein
scnpilot_p_inoc_scaffold_1976_11
Celeribacter indicus, Celeribacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13699..14406
DNA (708bp) protein (236aa)
Replicative DNA helicase n=1 Tax=Rhizobium sp. CF142 RepID=J2B177_9RHIZ
replicative DNA helicase
Replicative DNA helicase {ECO:0000313|EMBL:AJE45679.1}; TaxID=1208324 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Celeribacter.;" source="Celeribacter in
scnpilot_p_inoc_scaffold_1976_12
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14742..15401
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QWI8_METTR
Putative uncharacterized protein {ECO:0000313|EMBL:EHK53684.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhiz
hypothetical protein
scnpilot_p_inoc_scaffold_1976_13
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15398..15793
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI000377DD4A
Putative uncharacterized protein {ECO:0000313|EMBL:EHK53685.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhiz
hypothetical protein
scnpilot_p_inoc_scaffold_1976_14
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16040..17008)
DNA (969bp) protein (323aa)
UPI0003CF1835 related cluster n=1 Tax=unknown RepID=UPI0003CF1835 rbh
Membrane protein {ECO:0000313|EMBL:KKB08712.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1976_15
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17032..17226)
DNA (195bp) protein (65aa)
Uncharacterized protein {ECO:0000313|EMBL:KKB08711.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
scnpilot_p_inoc_scaffold_1976_16
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17408..17812
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PJB2_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KKB10172.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1976_17
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17952..18311)
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=filamentous cyanobacterium ESFC-1 RepID=UPI0003666DBD
Uncharacterized protein {ECO:0000313|EMBL:KKB76624.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
scnpilot_p_inoc_scaffold_1976_18
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18498..18788
DNA (291bp) protein (97aa)
10 kDa chaperonin n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RAE2_PELHB
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=429727 speci
heat shock protein 60 family co-chaperone GroES
scnpilot_p_inoc_scaffold_1976_19
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18837..19052
DNA (216bp) protein (72aa)
60 kDa chaperonin n=1 Tax=Nitratireductor indicus C115 RepID=K2NMZ2_9RHIZ
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=429727 speci
groEL-4; chaperonin GroEL 4
Displaying 19 items

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