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scnpilot_p_inoc_scaffold_1999

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1999_1
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..285
DNA (285bp) protein (95aa)
Phage DNA packaging protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE00_PELHB
ATP-binding protein {ECO:0000313|EMBL:KKB10226.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
phage DNA packaging protein
scnpilot_p_inoc_scaffold_1999_2

Not on your lists

comp(282..701)
DNA (420bp) protein (140aa)
PilT protein n=1 Tax=mine drainage metagenome RepID=T0ZPP9_9ZZZZ
PilT protein {ECO:0000313|EMBL:EQD46482.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
stbB; plasmid stability protein StbB
scnpilot_p_inoc_scaffold_1999_3
Nocardia brasiliensis, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(702..998)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Nocardia brasiliensis ATCC 700358 RepID=K0ERX9_9NOCA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFT98475.1}; TaxID=1133849 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia brasiliensis ATCC 700358.;"
scnpilot_p_inoc_scaffold_1999_4
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1070..2236
DNA (1167bp) protein (389aa)
Phage portal protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE01_PELHB
Portal protein {ECO:0000313|EMBL:KKB09033.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
phage portal protein
scnpilot_p_inoc_scaffold_1999_5
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3130..3780
DNA (651bp) protein (217aa)
Uncharacterized protein {ECO:0000313|EMBL:KFL29363.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
scnpilot_p_inoc_scaffold_1999_6
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3856..4044
DNA (189bp) protein (63aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI0003610D37
Uncharacterized protein {ECO:0000313|EMBL:KKB09034.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1999_7
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4049..4186
DNA (138bp) protein (46aa)
Uncharacterized protein {ECO:0000313|EMBL:KFC65034.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
scnpilot_p_inoc_scaffold_1999_8
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4186..4665
DNA (480bp) protein (160aa)
Phage prohead protease, HK97 family n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE04_PELHB
Peptidase U35 {ECO:0000313|EMBL:KKB09035.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
phage prohead protease, HK97 family
scnpilot_p_inoc_scaffold_1999_9
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4678..5898
DNA (1221bp) protein (407aa)
Phage major capsid protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE05_PELHB rbh
Capsid protein {ECO:0000313|EMBL:KKB09036.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
phage major capsid protein
scnpilot_p_inoc_scaffold_1999_10
Dichelobacter nodosus, Dichelobacter, Cardiobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5962..7386)
DNA (1425bp) protein (475aa)
alkaline phosphatase (EC:3.1.3.1)
Alkaline phosphatase {ECO:0000313|EMBL:ABQ14117.1}; EC=3.1.3.1 {ECO:0000313|EMBL:ABQ14117.1};; TaxID=246195 species="Bacteria; Proteobacteria; Gammaproteobacteria; Cardiobacteriales; Cardiobacteriacea
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI00037CCC77 rbh
scnpilot_p_inoc_scaffold_1999_11
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7514..8080
DNA (567bp) protein (189aa)
Gene transfer agent (GTA) n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE06_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL29360.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1999_12
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8077..8421
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE07_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB76413.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1999_13
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8425..8817
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE08_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB76412.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1999_14
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8974..9387
DNA (414bp) protein (138aa)
Gene transfer agent (GTA) n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE09_PELHB
Tail protein {ECO:0000313|EMBL:KFL29359.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1999_15
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9551..9865
DNA (315bp) protein (105aa)
SN-glycerol-3-phosphate ABC transporter n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE11_PELHB
Transfer Agent {ECO:0000313|EMBL:KFL29358.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
SN-glycerol-3-phosphate ABC transporter
scnpilot_p_inoc_scaffold_1999_16
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9862..10053
DNA (192bp) protein (64aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VEN5_RHOPX
Uncharacterized protein {ECO:0000313|EMBL:KFL29357.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1999_17
Devosia insulae, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10043..10594
DNA (552bp) protein (184aa)
Gene transfer agent (GTA) n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE13_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB83905.1}; TaxID=1116389 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia insulae DS-56.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1999_18
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10619..11239
DNA (621bp) protein (207aa)
Gene transfer agent (GTA) n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE14_PELHB
Glycoside hydrolase family 24 {ECO:0000313|EMBL:KFL29355.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.
hypothetical protein
scnpilot_p_inoc_scaffold_1999_19
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11236..12126
DNA (891bp) protein (297aa)
FAD/FMN-containing dehydrogenase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE15_PELHB rbh
Uncharacterized protein {ECO:0000313|EMBL:KKB81277.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
FAD/FMN-containing dehydrogenase
scnpilot_p_inoc_scaffold_1999_20
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12123..12539
DNA (417bp) protein (139aa)
NLP/P60 family protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE16_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB86618.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;
NLP/P60 family protein
scnpilot_p_inoc_scaffold_1999_21
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12757..16503
DNA (3747bp) protein (1249aa)
Phage Host Specificity protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE17_PELHB rbh
Uncharacterized protein {ECO:0000313|EMBL:KKB81275.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
phage Host Specificity protein
scnpilot_p_inoc_scaffold_1999_22
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16487..17227
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE19_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB09046.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1999_23
Fulvimarina pelagi, Fulvimarina, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17282..17530
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0G3L6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EAU41815.1}; TaxID=314231 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Fulvimarina.;" source="Fulvimarina pelagi HT
scnpilot_p_inoc_scaffold_1999_24
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17775..18074
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE20_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB86621.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;
hypothetical protein
scnpilot_p_inoc_scaffold_1999_25
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18098..18757
DNA (660bp) protein (220aa)
Two-component system response regulator QseB n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE21_PELHB rbh
Transcriptional regulator {ECO:0000313|EMBL:KKB09047.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
two-component system response regulator QseB
scnpilot_p_inoc_scaffold_1999_26
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18802..20184
DNA (1383bp) protein (461aa)
Periplasmic sensor signal transduction histidine kinase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE22_PELHB rbh
Uncharacterized protein {ECO:0000313|EMBL:KKB81356.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
sensor signal transduction histidine kinase
scnpilot_p_inoc_scaffold_1999_27
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20243..20719
DNA (477bp) protein (159aa)
LipA a lipoprotein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE23_PELHB
LipA a lipoprotein {ECO:0000313|EMBL:KFC71162.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
LipA a lipoprotein
scnpilot_p_inoc_scaffold_1999_28
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20808..22025
DNA (1218bp) protein (406aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE24_PELHB rbh
Uncharacterized protein {ECO:0000313|EMBL:KKB09049.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1999_29
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22022..24013)
DNA (1992bp) protein (664aa)
Sarcosine oxidase alpha subunit n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE25_PELHB rbh
Uncharacterized protein {ECO:0000313|EMBL:KFL29349.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
sarcosine oxidase alpha subunit
scnpilot_p_inoc_scaffold_1999_30
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24010..25272)
DNA (1263bp) protein (421aa)
Homocysteine S-methyltransferase n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BYS5_NITHN
Uncharacterized protein {ECO:0000313|EMBL:KFC71165.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
homocysteine S-methyltransferase
Displaying items 1-30 of 31 in total

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