ggKbase home page

scnpilot_p_inoc_scaffold_13606

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_13606_1
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..266)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F2S1_9RHIZ
Putative chitinase {ECO:0000313|EMBL:EYR79819.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
putative chitinase
scnpilot_p_inoc_scaffold_13606_2
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(268..537)
DNA (270bp) protein (90aa)
Terminase-like family (Fragment) n=1 Tax=Rhizobium sp. CF080 RepID=J3ASH8_9RHIZ
Phage DNA Packaging Protein
Phage DNA Packaging Protein {ECO:0000313|EMBL:CDN53206.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" s
scnpilot_p_inoc_scaffold_13606_3
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(687..923)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6I8_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB10283.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
scnpilot_p_inoc_scaffold_13606_4
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

993..1835
DNA (843bp) protein (281aa)
Heme A synthase {ECO:0000256|HAMAP-Rule:MF_01665}; Short=HAS {ECO:0000256|HAMAP-Rule:MF_01665};; EC=1.3.-.- {ECO:0000256|HAMAP-Rule:MF_01665};; Cytochrome aa3-controlling protein {ECO:0000256|HAMAP-Ru
Heme A synthase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6I9_PELHB rbh
heme A synthase, cytochrome oxidase biogenesis protein Cox15-CtaA
scnpilot_p_inoc_scaffold_13606_5
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1934..2419
DNA (486bp) protein (162aa)
50S ribosomal protein L13 n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6J0_PELHB
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|SAAS:SAAS00083943}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia
50S ribosomal protein L13
scnpilot_p_inoc_scaffold_13606_6
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2421..2900
DNA (480bp) protein (160aa)
30S ribosomal protein S9 n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6J1_PELHB
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.
30S ribosomal protein S9
scnpilot_p_inoc_scaffold_13606_7
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3081..3368
DNA (288bp) protein (96aa)
Putative Excinuclease ABC, C subunit, N-terminal n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0RSR2_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KFL29130.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
putative nuclease
scnpilot_p_inoc_scaffold_13606_8
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3433..4080
DNA (648bp) protein (216aa)
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI000361A3EA
Immunity protein SdpI {ECO:0000313|EMBL:KFC71026.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
hypothetical protein
scnpilot_p_inoc_scaffold_13606_9
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4248..5399
DNA (1152bp) protein (384aa)
sodium:proton antiporter n=1 Tax=Aureimonas ureilytica RepID=UPI0003827ED9
Sodium:proton antiporter {ECO:0000313|EMBL:KFL31670.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
proton/glutamate transport protein
scnpilot_p_inoc_scaffold_13606_10
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5607..6938)
DNA (1332bp) protein (444aa)
Putative cytochrome P450 hydroxylase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RAH7_PELHB rbh
Cytochrome P450 {ECO:0000313|EMBL:KKB10284.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
cytochrome P450 hydroxylase
scnpilot_p_inoc_scaffold_13606_11
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6998..7243
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2Q318_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF58099.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;"
hypothetical protein
scnpilot_p_inoc_scaffold_13606_12
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7240..7524
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FCX3_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCV15072.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
hypothetical protein
scnpilot_p_inoc_scaffold_13606_13
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7538..7768
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RAH6_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL32556.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
scnpilot_p_inoc_scaffold_13606_14
unknown

Not on your lists

7773..8099
DNA (327bp) protein (109aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_13606_15
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8342..8506
DNA (165bp) protein (55aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopep
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RAH5_PELHB
ATP-dependent Clp protease proteolytic subunit
Displaying 15 items

View Taxonomy