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scnpilot_p_inoc_scaffold_5946

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_5946_1
unknown

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1..87
DNA (87bp) protein (29aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_5946_2
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(260..733)
DNA (474bp) protein (158aa)
Transcriptional regulator, MarR family n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R7V6_PELHB
transcriptional regulator, MarR family
Transcriptional regulator, MarR family {ECO:0000313|EMBL:AEQ50251.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="P
scnpilot_p_inoc_scaffold_5946_3
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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995..1537
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R7V7_PELHB
TRAP dicarboxylate transporter subunit DctQ
Uncharacterized protein {ECO:0000313|EMBL:AEQ50252.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacterium
scnpilot_p_inoc_scaffold_5946_4
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1534..2859
DNA (1326bp) protein (442aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R7V8_PELHB rbh
TRAP dicarboxylate transporter subunit DctM
Uncharacterized protein {ECO:0000313|EMBL:AEQ50253.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacterium
scnpilot_p_inoc_scaffold_5946_5
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2953..3975
DNA (1023bp) protein (341aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R7V9_PELHB rbh
TRAP transporter solute receptor
Uncharacterized protein {ECO:0000313|EMBL:AEQ50254.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacterium
scnpilot_p_inoc_scaffold_5946_6
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4338..5495)
DNA (1158bp) protein (386aa)
4-hydroxybenzoate 3-monooxygenase {ECO:0000313|EMBL:KKC33914.1}; EC=1.14.13.2 {ECO:0000313|EMBL:KKC33914.1};; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomic
p-hydroxybenzoate hydroxylase transcriptional activator (EC:1.14.13.2)
4-hydroxybenzoate 3-monooxygenase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0003819996 rbh
scnpilot_p_inoc_scaffold_5946_7
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5546..6415
DNA (870bp) protein (290aa)
Transcriptional regulator, AraC-family n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCS9_PELHB
Transcriptional regulator, AraC-family {ECO:0000313|EMBL:KFC71202.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia s
AraC family transcriptional regulator
scnpilot_p_inoc_scaffold_5946_8
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6417..6731)
DNA (315bp) protein (105aa)
Transcriptional regulator, LysR family n=2 Tax=Ketogulonicigenium vulgare RepID=E3F5I2_KETVY
LysR family transcriptional regulator {ECO:0000313|EMBL:KFL32039.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia ribo
pcaQ; Pca operon transcription factor PcaQ
Displaying 8 items

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