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scnpilot_p_inoc_scaffold_2103

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_2103_1
unknown

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comp(2..97)
DNA (96bp) protein (32aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_2103_2
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(116..1225)
DNA (1110bp) protein (370aa)
Basic membrane lipoprotein n=1 Tax=Ochrobactrum intermedium M86 RepID=M5K3X2_9RHIZ rbh
Nucleoside ABC transporter, periplasmic nucleoside-binding protein {ECO:0000313|EMBL:CDP53689.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae;
basic membrane lipoprotein
scnpilot_p_inoc_scaffold_2103_3
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1402..2385
DNA (984bp) protein (328aa)
LacI family transcriptional regulator (EC:5.1.1.1)
LacI family transcription regulator n=1 Tax=Thermus islandicus RepID=UPI0003B5E1BB
Uncharacterized protein {ECO:0000313|EMBL:CDP53688.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
scnpilot_p_inoc_scaffold_2103_4
Devosia insulae, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2530..4050)
DNA (1521bp) protein (507aa)
Putative uncharacterized protein n=1 Tax=Halomonas sp. TD01 RepID=F7SND4_9GAMM rbh
Protein CyaE {ECO:0000256|PIRNR:PIRNR001892}; TaxID=1116389 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia insulae DS-56.;"
transporter rbh
scnpilot_p_inoc_scaffold_2103_5
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4050..6041)
DNA (1992bp) protein (664aa)
Putative uncharacterized protein n=1 Tax=Halomonas sp. TD01 RepID=F7SND5_9GAMM rbh
Probable membrane protein YPO0618 {ECO:0000313|EMBL:CDP54245.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DD
transporter
scnpilot_p_inoc_scaffold_2103_6
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6022..6651)
DNA (630bp) protein (210aa)
Multidrug resistance protein MdtN n=1 Tax=Halomonas sp. TD01 RepID=F7SND6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KFL30000.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
multidrug transporter
scnpilot_p_inoc_scaffold_2103_7
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6596..6856)
DNA (261bp) protein (87aa)
Multidrug resistance protein MdtN n=1 Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=G0EZ35_CUPNN
Uncharacterized protein {ECO:0000313|EMBL:KFL30000.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
multidrug transporter
scnpilot_p_inoc_scaffold_2103_8
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6856..7200)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Halomonas sp. GFAJ-1 RepID=H0J3T5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KFL29999.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
scnpilot_p_inoc_scaffold_2103_9
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7329..8063
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFZ1_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB09158.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
scnpilot_p_inoc_scaffold_2103_10
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8094..9563
DNA (1470bp) protein (490aa)
GTPase Der n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFZ2_PELHB rbh
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobact
GTP-binding protein EngA
scnpilot_p_inoc_scaffold_2103_11
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9696..10982
DNA (1287bp) protein (429aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. RepID=L0NH44_RHISP
DNA-binding protein {ECO:0000313|EMBL:KKB81328.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
Hemolysin/magnesium/cobalt transporter CorC/HlyC
scnpilot_p_inoc_scaffold_2103_12
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11432..12025)
DNA (594bp) protein (198aa)
acetyltransferase protein (EC:2.3.1.48)
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UWA9_9RHIZ
Acetyltransferase {ECO:0000313|EMBL:KKC34651.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
scnpilot_p_inoc_scaffold_2103_13
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12028..12762)
DNA (735bp) protein (245aa)
Oxidoreductase, short-chain dehydrogenase/reductase family n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFZ3_PELHB rbh
Oxidoreductase {ECO:0000313|EMBL:KFL30570.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
short-chain dehydrogenase
scnpilot_p_inoc_scaffold_2103_14
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12762..14264)
DNA (1503bp) protein (501aa)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256
purF; amidophosphoribosyltransferase (EC:2.4.2.14)
amidophosphoribosyltransferase n=1 Tax=Agrobacterium sp. 224MFTsu3.1 RepID=UPI0003761B56 rbh
scnpilot_p_inoc_scaffold_2103_15
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14400..15026)
DNA (627bp) protein (209aa)
Colicin V production protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFZ5_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL30568.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
colicin V production protein
scnpilot_p_inoc_scaffold_2103_16
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15138..16442)
DNA (1305bp) protein (435aa)
DNA repair protein radA n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFZ6_PELHB rbh
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
DNA repair protein RadA
scnpilot_p_inoc_scaffold_2103_17
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16554..17138)
DNA (585bp) protein (195aa)
Uncharacterized protein {ECO:0000313|EMBL:KFL30566.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
scnpilot_p_inoc_scaffold_2103_18
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17518..18645)
DNA (1128bp) protein (376aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201};; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae;
Alanine racemase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFZ7_PELHB rbh
alanine racemase
scnpilot_p_inoc_scaffold_2103_19
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18648..20132)
DNA (1485bp) protein (495aa)
Replicative DNA helicase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RGI2_PELHB rbh
DNA helicase {ECO:0000313|EMBL:KKB81166.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
replicative DNA helicase
scnpilot_p_inoc_scaffold_2103_20
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(20368..20850)
DNA (483bp) protein (161aa)
50S ribosomal protein L9 n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D426_9RHIZ
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;
50S ribosomal protein L9
Displaying 20 items

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