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scnpilot_p_inoc_scaffold_2864

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_2864_1
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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261..458
DNA (198bp) protein (66aa)
ATP-dependent protease subunit HslV {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019556}; EC=3.4.25.2 {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019493};; TaxID=429727 specie
ATP-dependent protease subunit HslV (EC:3.4.25.1)
ATP-dependent protease subunit HslV n=1 Tax=Asticcacaulis benevestitus DSM 16100 = ATCC BAA-896 RepID=V4Q8H3_9CAUL
scnpilot_p_inoc_scaffold_2864_2
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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458..772
DNA (315bp) protein (105aa)
ATP-dependent protease subunit HslV {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019556}; EC=3.4.25.2 {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019493};; TaxID=429727 specie
ATP-dependent protease subunit HslV n=1 Tax=alpha proteobacterium JLT2015 RepID=M2S934_9PROT
hslV; ATP-dependent protease peptidase subunit
scnpilot_p_inoc_scaffold_2864_3
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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769..1293
DNA (525bp) protein (175aa)
Putative acetyltransferase protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R7S1_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL30133.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
Acyl-CoA N-acyltransferase
scnpilot_p_inoc_scaffold_2864_4
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1286..2596
DNA (1311bp) protein (437aa)
ATP-dependent protease ATPase subunit HslU n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R7S0_PELHB rbh
ATP-dependent protease ATPase subunit HslU {ECO:0000256|HAMAP-Rule:MF_00249, ECO:0000256|SAAS:SAAS00089650}; Unfoldase HslU {ECO:0000256|HAMAP-Rule:MF_00249}; TaxID=429727 species="Bacteria; Proteobac
ATP-dependent hsl protease ATP-binding subunit HslU
scnpilot_p_inoc_scaffold_2864_5
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2797..3165)
DNA (369bp) protein (123aa)
Transcriptional regulator, XRE family n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R7R7_PELHB
XRE family transcriptional regulator {ECO:0000313|EMBL:KKB78825.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli
XRE family transcriptional regulator
scnpilot_p_inoc_scaffold_2864_6
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3162..3743)
DNA (582bp) protein (194aa)
Smr protein/MutS2 n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R7R6_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL30136.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
Smr protein/MutS2
scnpilot_p_inoc_scaffold_2864_7
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3769..4488)
DNA (720bp) protein (240aa)
Transporter n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R7R5_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB07813.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
transporter
scnpilot_p_inoc_scaffold_2864_8
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4660..5121
DNA (462bp) protein (154aa)
FxsA cytoplasmic membrane protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R7R4_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB07812.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
FxsA cytoplasmic membrane protein
scnpilot_p_inoc_scaffold_2864_9
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5211..5726
DNA (516bp) protein (172aa)
Protein-export protein SecB n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R7R3_PELHB
Protein-export protein SecB {ECO:0000256|HAMAP-Rule:MF_00821}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavin
protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state)
scnpilot_p_inoc_scaffold_2864_10
Devosia insulae, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5791..6501)
DNA (711bp) protein (237aa)
DNA polymerase III epsilon subunit n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R7R2_PELHB rbh
DNA polymerase III subunit epsilon {ECO:0000313|EMBL:KKB82080.1}; TaxID=1116389 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia insul
DNA polymerase III epsilon subunit
scnpilot_p_inoc_scaffold_2864_11
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6498..7094)
DNA (597bp) protein (199aa)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=361041 species="Bacteria; Pr
Dephospho-CoA kinase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R7R1_PELHB
dephospho-CoA kinase
scnpilot_p_inoc_scaffold_2864_12
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7097..7927)
DNA (831bp) protein (277aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222};; TaxID=
Shikimate dehydrogenase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R7R0_PELHB rbh
shikimate 5-dehydrogenase
scnpilot_p_inoc_scaffold_2864_13
Devosia insulae, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7924..8550)
DNA (627bp) protein (209aa)
Maf-like protein KKY_3332 n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R7Q9_PELHB
Maf-like protein VW23_12280 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=1116389 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia insulae
Maf-like protein
scnpilot_p_inoc_scaffold_2864_14
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8974..10005
DNA (1032bp) protein (344aa)
Uroporphyrinogen decarboxylase {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554}; Short=UPD {ECO:0000256|HAMAP-Rule:MF_00218};; Short=URO-D {ECO:0000256|HAMAP-Rule:MF_00218};; EC=4.1.1.
Uroporphyrinogen decarboxylase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R7Q8_PELHB rbh
uroporphyrinogen III decarboxylase
scnpilot_p_inoc_scaffold_2864_15
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10018..10443
DNA (426bp) protein (142aa)
Putative membrane protein, possible involvement in cytochrome functioning/assembly n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R7Q7_PELHB
Membrane protein {ECO:0000313|EMBL:KKB07807.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
scnpilot_p_inoc_scaffold_2864_16
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10619..11566
DNA (948bp) protein (316aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=46914 species
Transcription termination factor Rho n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R7Q6_PELHB
transcription termination factor Rho
Displaying 16 items

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