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scnpilot_p_inoc_scaffold_1236_22

Organism: SCNpilot_P_inoc_Devosia_62_4

partial RP 38 / 55 BSCG 38 / 51 ASCG 9 / 38
Location: comp(23749..24351)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07TS2_RHOP5 similarity UNIREF
DB: UNIREF100
  • Identity: 52.0
  • Coverage: 196.0
  • Bit_score: 183
  • Evalue 1.60e-43
Transcriptional regulator, TetR family {ECO:0000313|EMBL:KFC64378.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia s similarity UNIPROT
DB: UniProtKB
  • Identity: 63.9
  • Coverage: 194.0
  • Bit_score: 234
  • Evalue 1.50e-58
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 52.0
  • Coverage: 196.0
  • Bit_score: 183
  • Evalue 4.60e-44

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Taxonomy

Devosia sp. LC5 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 603
ATGCAAGTCGAACGGCGAACACAGGATGAGCGGCGAGAGGCGACGCGCACGGCTCTGCTCGATGCGGCAAGATCGCTCTTCGCAAAAAAAGGCTATGCCGGTACCAGCACCCCCGAGATCGTCGCGGCGGCGGGCGTGACGCGCGGCGCGCTCTACCATCACTTCCCCGACAAGCTCGCTCTCTTTGCGGCCGTGGTGGTAGAGGAGCACCGCGCCGTGGCCGATGCCATTGGCGCTGCCGGCGACGGAGATGCGGCCCCACCAGACATGATCGAGGCGCTTGTTGCGGGGGGCGAGGCCTTCATACTGGCCATGCAGGATGAAGGCCGAAGGCGCATCATGCTGGTCGATGCGCCTGCGGTTTTGGGCCGCGAGGCGGTGGACGGCATCAATGCCGAATATGGCCTGCGCACCCTGATCGATGGCGTGCAATGCGCCATCGATCAGGGTGTCATGGCACCGGTGCCCGTCTGGCCCATGGCGCATTTGCTCAACGCCGTCTTCGACCGCGCCGCTCTTGCGCCGGCGGATGAGGTGGCTGCCTTTCGGGATGCAATCGACGCCCTGCTGCGCGGTTTGCGCCAGACGTCCCCTCGCCCCTGA
PROTEIN sequence
Length: 201
MQVERRTQDERREATRTALLDAARSLFAKKGYAGTSTPEIVAAAGVTRGALYHHFPDKLALFAAVVVEEHRAVADAIGAAGDGDAAPPDMIEALVAGGEAFILAMQDEGRRRIMLVDAPAVLGREAVDGINAEYGLRTLIDGVQCAIDQGVMAPVPVWPMAHLLNAVFDRAALAPADEVAAFRDAIDALLRGLRQTSPRP*