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scnpilot_p_inoc_scaffold_1236

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1236_1
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..795)
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B9W7_PARDP
GguC protein {ECO:0000313|EMBL:KKB79874.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1236_2
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1080..2153
DNA (1074bp) protein (358aa)
Protein RecA n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE92_PELHB rbh
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=46914 species="Bacteria; Proteobact
recombinase A
scnpilot_p_inoc_scaffold_1236_3
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2495..5134
DNA (2640bp) protein (880aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256
Alanine--tRNA ligase n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0T8A0_9BRAD
alanyl-tRNA synthetase
scnpilot_p_inoc_scaffold_1236_4
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5213..6097)
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE89_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB79872.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1236_5
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6388..8082
DNA (1695bp) protein (565aa)
von Willebrand factor type A n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HXP4_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:KFL30904.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
von Willebrand factor type A
scnpilot_p_inoc_scaffold_1236_6
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8211..9422)
DNA (1212bp) protein (404aa)
Isocitrate dehydrogenase [NADP] {ECO:0000256|PIRNR:PIRNR000108}; EC=1.1.1.42 {ECO:0000256|PIRNR:PIRNR000108};; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphom
Isocitrate dehydrogenase [NADP] n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE88_PELHB rbh
isocitrate dehydrogenase
scnpilot_p_inoc_scaffold_1236_7
Devosia epidermidihirudinis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9528..9863)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE85_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKC35486.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudi
hypothetical protein
scnpilot_p_inoc_scaffold_1236_8
Devosia epidermidihirudinis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9860..10333)
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE83_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKC35485.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudi
hypothetical protein
scnpilot_p_inoc_scaffold_1236_9
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10376..10978
DNA (603bp) protein (201aa)
Acetyltransferase n=3 Tax=Amycolatopsis mediterranei RepID=G0G3P4_AMYMS
Uncharacterized protein {ECO:0000313|EMBL:KKB10376.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
acetyltransferase
scnpilot_p_inoc_scaffold_1236_10
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11072..11668
DNA (597bp) protein (199aa)
Putative acetyltransferase n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D6E2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KKB09868.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
putative acetyltransferase
scnpilot_p_inoc_scaffold_1236_11
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11868..13391
DNA (1524bp) protein (508aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Acidovorax sp. CF316 RepID=J1ED65_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KFL30900.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
diguanylate cyclase
scnpilot_p_inoc_scaffold_1236_12
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13432..14130
DNA (699bp) protein (233aa)
tRNA:Cm32/Um32 methyltransferase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE81_PELHB rbh
RNA methyltransferase {ECO:0000313|EMBL:KKB10375.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
tRNA:Cm32/Um32 methyltransferase
scnpilot_p_inoc_scaffold_1236_13
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14384..15622
DNA (1239bp) protein (413aa)
Permease n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QJM0_9RHIZ rbh
MFS transporter {ECO:0000313|EMBL:KFL30898.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
MFS permease
scnpilot_p_inoc_scaffold_1236_14
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


15798..16415
DNA (618bp) protein (206aa)
30S ribosomal protein S4 n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE79_PELHB rbh
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis
30S ribosomal protein S4
scnpilot_p_inoc_scaffold_1236_15
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17060..18376)
DNA (1317bp) protein (439aa)
Predicted transporter n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9DDH9_9RHIZ rbh
Microcin B17 transporter {ECO:0000313|EMBL:KKB86851.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.
BacA, bacteroid development protein
scnpilot_p_inoc_scaffold_1236_16
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18544..19416
DNA (873bp) protein (291aa)
tRNA 2-thiocytidine biosynthesis protein TtcA n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE77_PELHB rbh
tRNA 2-thiocytidine biosynthesis protein TtcA {ECO:0000256|HAMAP-Rule:MF_01850}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source=
tRNA(cytosine32)-2-thiocytidine synthetase
scnpilot_p_inoc_scaffold_1236_17
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19428..20231
DNA (804bp) protein (268aa)
inositol monophosphatase n=1 Tax=Rhizobium leguminosarum RepID=UPI000371857D rbh
inositol monophosphatase
Inositol monophosphatase {ECO:0000313|EMBL:ACS56430.1}; TaxID=395491 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sour
scnpilot_p_inoc_scaffold_1236_18
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20267..21079
DNA (813bp) protein (271aa)
Inositol monophosphatase and related sulfite synthesis enzyme n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE76_PELHB rbh
Inositol monophosphatase {ECO:0000313|EMBL:KKB09863.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
inositol monophosphatase
scnpilot_p_inoc_scaffold_1236_19
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21691..22884)
DNA (1194bp) protein (398aa)
Serine--glyoxylate transaminase (EC:2.6.1.45)
Serine--glyoxylate transaminase n=1 Tax=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) RepID=A4WU45_RHOS5
Septum site-determining protein {ECO:0000313|EMBL:KKB09861.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhaten
scnpilot_p_inoc_scaffold_1236_20
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22992..23306
DNA (315bp) protein (105aa)
ArsR family transcriptional regulator n=1 Tax=Aureimonas ureilytica RepID=UPI0003805B1B
ArsR family transcriptional regulator {ECO:0000313|EMBL:KFL30892.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia ribo
sdpR; ArsR family transcriptional regulator
scnpilot_p_inoc_scaffold_1236_21
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23303..23725
DNA (423bp) protein (141aa)
Putative endosialidase n=1 Tax=uncultured Mediterranean phage MEDS2 group RepID=K7YBB4_9VIRU
Uncharacterized protein {ECO:0000313|EMBL:KFC64377.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1236_22
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23749..24351)
DNA (603bp) protein (201aa)
Transcriptional regulator, TetR family n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07TS2_RHOP5
Transcriptional regulator, TetR family {ECO:0000313|EMBL:KFC64378.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia s
TetR family transcriptional regulator
scnpilot_p_inoc_scaffold_1236_23
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24429..24608
DNA (180bp) protein (60aa)
Glyoxalase n=1 Tax=Cupriavidus sp. HPC(L) RepID=V2I9Y7_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KKB08011.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
putative glyoxalase
Displaying 23 items

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