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scnpilot_p_inoc_scaffold_1927_8

Organism: SCNpilot_P_inoc_Devosia_62_4

partial RP 38 / 55 BSCG 38 / 51 ASCG 9 / 38
Location: comp(6753..7292)

Top 3 Functional Annotations

Value Algorithm Source
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=429727 species="Ba similarity UNIPROT
DB: UniProtKB
  • Identity: 82.7
  • Coverage: 179.0
  • Bit_score: 307
  • Evalue 9.40e-81
2'-5' RNA ligase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6Y7_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 64.8
  • Coverage: 179.0
  • Bit_score: 244
  • Evalue 9.10e-62
2'-5' RNA ligase similarity KEGG
DB: KEGG
  • Identity: 64.8
  • Coverage: 179.0
  • Bit_score: 244
  • Evalue 2.60e-62

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Taxonomy

Devosia chinhatensis → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 540
ATGCCCCGGCTCTTTACCGGCCTTGAAATTCCACACGATGTGGCCTTTGCCCTATCGCTGAAGCGCGGCGGACTCACCGGCGCCCGCTGGATCGATCCGGAAAACTATCACATCACCCTGCGCTTCATCGGCGATGTCGACGGCGGCGTGGCCGACGAGGTGGCTGATAGCCTCGACCGGCTGTCCAATTCGCTGCGCTTTGCCGTGCGCCTCACCCATCTGGGCAGTTTTGGCGGCGACAAGCCGCGGGCGCTGTTTGCCGGCATCGAGCCTTCCGAAGCGCTGAGCCGGTTGCAGGCGGCGCATGAGCGCATGCTGCAAAAGGCGGGCCTTGCCCCCGAGGGCCGCAAATTCGTGCCCCATGTGACCCTCGCCCGTTTGCGCGGCTCGAGCGCCGAGGATGTGGCGCGCTTTATTTCCGAGGCCGCCCGGTTCGAGCCACTGAGCTTCGTGCCGGCCCGCTTCGTGCTCTATTCGAGCCGGGATTCGGTCGGCGGCGGCCCCTATGTGGTCGAACAGAGCTATCCCCTGGCCGCGTGA
PROTEIN sequence
Length: 180
MPRLFTGLEIPHDVAFALSLKRGGLTGARWIDPENYHITLRFIGDVDGGVADEVADSLDRLSNSLRFAVRLTHLGSFGGDKPRALFAGIEPSEALSRLQAAHERMLQKAGLAPEGRKFVPHVTLARLRGSSAEDVARFISEAARFEPLSFVPARFVLYSSRDSVGGGPYVVEQSYPLAA*