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scnpilot_p_inoc_scaffold_1927

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1927_1
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

155..1129
DNA (975bp) protein (325aa)
Zn-dependent oxidoreductase, NADPH:quinone reductase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YZQ5_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:KFL29937.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
NADPH quinone reductase or zn-dependent oxidoreductase
scnpilot_p_inoc_scaffold_1927_2
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1370..2488)
DNA (1119bp) protein (373aa)
Acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase-related deacylase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6K8_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB08299.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase-related deacylase
scnpilot_p_inoc_scaffold_1927_3
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2785..3564
DNA (780bp) protein (260aa)
Transcriptional regulator, GntR family n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R7W3_PELHB
GntR family transcriptional regulator {ECO:0000313|EMBL:KKB08300.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chi
GntR family transcriptional regulator
scnpilot_p_inoc_scaffold_1927_4
Actinomyces sp. ICM39, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3581..3979)
DNA (399bp) protein (133aa)
Glyoxalase-like domain protein n=1 Tax=Actinomyces sp. ICM39 RepID=J3J517_9ACTO
Glyoxalase-like domain protein {ECO:0000313|EMBL:EJN45893.1}; TaxID=1105029 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM39.;"
Glyoxalase/bleomycin resistance protein/dioxygenase
scnpilot_p_inoc_scaffold_1927_5
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3979..5187)
DNA (1209bp) protein (403aa)
Dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:
Dual-specificity RNA methyltransferase RlmN n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6Y4_PELHB rbh
ribosomal RNA large subunit methyltransferase N
scnpilot_p_inoc_scaffold_1927_6
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5405..5911)
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6Y5_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB07776.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1927_7
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6002..6523)
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6Y6_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFC68617.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1927_8
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6753..7292)
DNA (540bp) protein (180aa)
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=429727 species="Ba
2'-5' RNA ligase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6Y7_PELHB
2'-5' RNA ligase
scnpilot_p_inoc_scaffold_1927_9
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7508..8233
DNA (726bp) protein (242aa)
Membrane protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6Y8_PELHB rbh
Membrane protein {ECO:0000313|EMBL:KFL30197.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1927_10
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8331..8828
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NNH4_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:KKB07779.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
N-acetyltransferase GCN5
scnpilot_p_inoc_scaffold_1927_11
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9107..9460)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RG89_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB07614.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1927_12
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9628..10218
DNA (591bp) protein (197aa)
Probable chemoreceptor glutamine deamidase CheD {ECO:0000256|HAMAP-Rule:MF_01440}; EC=3.5.1.44 {ECO:0000256|HAMAP-Rule:MF_01440};; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria;
Probable chemoreceptor glutamine deamidase CheD n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RG88_PELHB
chemotaxis protein CheD
scnpilot_p_inoc_scaffold_1927_13
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10370..11926
DNA (1557bp) protein (519aa)
Methyl-accepting chemotaxis protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RG87_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB07612.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
methyl-accepting chemotaxis protein
scnpilot_p_inoc_scaffold_1927_14
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11968..12813
DNA (846bp) protein (282aa)
Chemotaxis protein methyltransferase {ECO:0000256|PIRNR:PIRNR000410}; EC=2.1.1.80 {ECO:0000256|PIRNR:PIRNR000410};; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hy
Chemotaxis protein methyltransferase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RG86_PELHB rbh
chemotaxis protein CheR
scnpilot_p_inoc_scaffold_1927_15
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12810..13856
DNA (1047bp) protein (349aa)
Chemotaxis response regulator protein-glutamate methylesterase {ECO:0000256|HAMAP-Rule:MF_00099}; EC=3.1.1.61 {ECO:0000256|HAMAP-Rule:MF_00099};; TaxID=1502724 species="Bacteria; Proteobacteria; Alpha
Chemotaxis response regulator protein-glutamate methylesterase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RG85_PELHB
chemotaxis response regulator protein-glutamate methylesterase CheB
scnpilot_p_inoc_scaffold_1927_16
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13959..14348
DNA (390bp) protein (130aa)
Chemotaxis protein CheY n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RG84_PELHB
Chemotaxis protein CheY {ECO:0000313|EMBL:KKB07609.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
chemotaxis protein CheY
scnpilot_p_inoc_scaffold_1927_17
Labrenzia sp. C1B10, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14578..15672
DNA (1095bp) protein (365aa)
Methyl-accepting chemotaxis protein n=2 Tax=Labrenzia RepID=U7G4K2_9RHOB
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:ERP93170.1}; TaxID=1397530 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenz
diguanylate cyclase
scnpilot_p_inoc_scaffold_1927_18
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15837..16745)
DNA (909bp) protein (303aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylat
tRNA pseudouridine synthase B n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R997_PELHB rbh
tRNA pseudouridine synthase B
scnpilot_p_inoc_scaffold_1927_19
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16748..17155)
DNA (408bp) protein (136aa)
Ribosome-binding factor A n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R996_PELHB
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia
ribosome-binding factor A
scnpilot_p_inoc_scaffold_1927_20
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17189..17920)
DNA (732bp) protein (244aa)
Uncharacterized protein {ECO:0000313|EMBL:KKB07951.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
Displaying 20 items

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