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scnpilot_p_inoc_scaffold_2854_6

Organism: SCNpilot_P_inoc_Devosia_62_4

partial RP 38 / 55 BSCG 38 / 51 ASCG 9 / 38
Location: 2952..3977

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiacea similarity UNIPROT
DB: UniProtKB
  • Identity: 84.8
  • Coverage: 341.0
  • Bit_score: 598
  • Evalue 5.10e-168
Pseudouridine synthase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R950_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 65.0
  • Coverage: 323.0
  • Bit_score: 425
  • Evalue 4.20e-116
  • rbh
ribosomal large subunit pseudouridine synthase D similarity KEGG
DB: KEGG
  • Identity: 65.0
  • Coverage: 323.0
  • Bit_score: 425
  • Evalue 1.20e-116

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Taxonomy

Devosia soli → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1026
ATGGCAGAAGATACCGATTTCGAGTTCGAGGGCGAGCCCATTGAGGTTGTCGTCGATGCCGACATGGCCGGCGGCAGGCTGGATGCCGTGCTGGCCAAAGCCCACGACGTTTTGAGCCGCAGCCGCATCAAGGACCTAATCCTTGGTGGCGCCGTCAGCGTCGACGGGGCTGGTGTCAGCGAACCCAAATATAGACTGAAGGCCGGGGAGACAATCACCCTTCTTGCCCCGCCCCCGGAAGATCCCGAGCCGCAGGCCGAGGACATTCCGCTCGATATCCTTTATGAGGACGACCATCTGATCGTCATCAACAAGCCGGTCGGCATGGTGGTGCATCCCGCACCCGGCTCGCCCAATGGCACGCTGGTCAATGCACTGATCTTTCATTGCGGCGACAGCCTCAAGGGCATTGGCGGGGTCAAGCGACCGGGGATCGTGCATCGCCTCGACAAGGACACATCCGGGGTGATGGTCGCCGCCAAGACCGAAAAGGCGCATAAGCATCTCTCGGCCCAATTTGCTGATCACGGACGCACCGGTCCATTGCATCGCGCATATATTGCCTTTGCCTGGGGCACGACGCAGTCGGGTGTCGGCACGGTCGACGCGCCTCTGGGGCGCGACCCCGGCAATCGGTTGAAGCAGGCGGTGCTGCGCCATGGTCGCGAAGCGATTACGCACTATGCCGTAGAAGGCCGCTATGGTGGCGATGGCTGGGACGTCACTCGCATTCAATGCCAACTCGAAACCGGCCGCACGCATCAAATCCGCGTCCATATGGCTCATATCGGCCACCCACTTGTCGCCGATGCGCTTTATGCGTCGGGGTTTGTGACCAAGGTGAACAAGCTCCCTGAGGACCTGGCCGATATCGTGCGCAATCTGGGCCGACAGGCGCTGCATGCCGCAGAACTTGGTTTCGAGCATCCTGCCACTGGCGAGGAAATGCTGTTCGAGGCGGATTTGCCCGAGGATCTGCAGGCCCTGCAGGATGCGCTGGACGCCTATGATCACTCGGTCGCTTAG
PROTEIN sequence
Length: 342
MAEDTDFEFEGEPIEVVVDADMAGGRLDAVLAKAHDVLSRSRIKDLILGGAVSVDGAGVSEPKYRLKAGETITLLAPPPEDPEPQAEDIPLDILYEDDHLIVINKPVGMVVHPAPGSPNGTLVNALIFHCGDSLKGIGGVKRPGIVHRLDKDTSGVMVAAKTEKAHKHLSAQFADHGRTGPLHRAYIAFAWGTTQSGVGTVDAPLGRDPGNRLKQAVLRHGREAITHYAVEGRYGGDGWDVTRIQCQLETGRTHQIRVHMAHIGHPLVADALYASGFVTKVNKLPEDLADIVRNLGRQALHAAELGFEHPATGEEMLFEADLPEDLQALQDALDAYDHSVA*