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scnpilot_p_inoc_scaffold_2854

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_2854_1
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..154)
DNA (153bp) protein (51aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R941_PELHB
Histidine phosphotransferase {ECO:0000313|EMBL:KKB08240.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis
hypothetical protein
scnpilot_p_inoc_scaffold_2854_2
Devosia insulae, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(229..771)
DNA (543bp) protein (181aa)
YHS domain-containing protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R940_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB79698.1}; TaxID=1116389 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia insulae DS-56.;"
hypothetical protein
scnpilot_p_inoc_scaffold_2854_3
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

823..1392
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R939_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB07458.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
scnpilot_p_inoc_scaffold_2854_4
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1568..2587
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R938_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKC34150.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
hypothetical protein
scnpilot_p_inoc_scaffold_2854_5
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2603..2824)
DNA (222bp) protein (74aa)
Uncharacterized protein {ECO:0000313|EMBL:KKB07460.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
scnpilot_p_inoc_scaffold_2854_6
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2952..3977
DNA (1026bp) protein (342aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiacea
Pseudouridine synthase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R950_PELHB rbh
ribosomal large subunit pseudouridine synthase D
scnpilot_p_inoc_scaffold_2854_7
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4239..5111
DNA (873bp) protein (291aa)
RNA polymerase sigma factor RpoH n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R951_PELHB rbh
RNA polymerase sigma factor RpoH {ECO:0000256|HAMAP-Rule:MF_00961}; RNA polymerase sigma-32 factor {ECO:0000256|HAMAP-Rule:MF_00961}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria
RNA polymerase sigma factor RpoH
scnpilot_p_inoc_scaffold_2854_8
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5170..6444)
DNA (1275bp) protein (425aa)
hypothetical protein n=1 Tax=Streptomyces sp. CNQ766 RepID=UPI00036F5166
RNA polymerase subunit sigma-24 {ECO:0000313|EMBL:KFL29842.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavin
ECF family RNA polymerase sigma factor
scnpilot_p_inoc_scaffold_2854_9
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6575..7282)
DNA (708bp) protein (236aa)
Two-component cell cycle transcriptional regulator ctrA, winged helix family n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R944_PELHB rbh
Chemotaxis protein CheY {ECO:0000313|EMBL:KFL29844.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
two-component cell cycle transcriptional regulator ctrA, winged helix family
scnpilot_p_inoc_scaffold_2854_10
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7735..9063
DNA (1329bp) protein (443aa)
Flagellum-specific ATP synthase FliI n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R945_PELHB rbh
ATP synthase {ECO:0000313|EMBL:KKB07453.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
flagellum-specific ATP synthase FliI
scnpilot_p_inoc_scaffold_2854_11
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9128..9541
DNA (414bp) protein (138aa)
Flagellar protein FliJ n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R946_PELHB
Flagellar export protein FliJ {ECO:0000313|EMBL:KKB07452.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensi
flagellar protein FliJ
scnpilot_p_inoc_scaffold_2854_12
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9613..10587)
DNA (975bp) protein (325aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002E62091
PRC-barrel domain protein {ECO:0000313|EMBL:KFC62424.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
hypothetical protein
scnpilot_p_inoc_scaffold_2854_13
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10938..11195)
DNA (258bp) protein (86aa)
acetyltransferase n=1 Tax=Rhizobium leguminosarum RepID=UPI00036C734A
Acetyltransferase {ECO:0000313|EMBL:KKB08239.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
acetyltransferase
Displaying 13 items

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