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scnpilot_p_inoc_scaffold_3173_4

Organism: SCNpilot_P_inoc_Devosia_62_4

partial RP 38 / 55 BSCG 38 / 51 ASCG 9 / 38
Location: 3270..4127

Top 3 Functional Annotations

Value Algorithm Source
Probable DNA repair protein NGR_b04720 n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3KPC6_RHISN similarity UNIREF
DB: UNIREF100
  • Identity: 74.0
  • Coverage: 288.0
  • Bit_score: 432
  • Evalue 3.70e-118
  • rbh
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; TaxID=394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinor similarity UNIPROT
DB: UniProtKB
  • Identity: 74.0
  • Coverage: 288.0
  • Bit_score: 431
  • Evalue 6.80e-118
Ku78, Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen similarity KEGG
DB: KEGG
  • Identity: 73.6
  • Coverage: 288.0
  • Bit_score: 430
  • Evalue 3.10e-118

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Taxonomy

Sinorhizobium fredii → Sinorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 858
GTGGCACCGCGTGCAAACTGGAAGGGCTTTCTCAAGGTGGCGGAGCTGACCTGCCCCGTCGCGCTATATACCGCCGCCTCCACCTCCGACCGTATCGCCTTCCACACCCTTAATCGTGCCACCGGCCATCGCGTACGCCGGCAGTTTGTCGATAGCGATACCGGCAAGCCTGTCGAGCGCGACGATCAGGTGAAGGGCTATGAGGTTGGCTCCGGCGAATACATCACGCTCGATCCCGAAACCGTCGCCGCCGCCGTGCCCGACAGTGACAAGACCCTCGATATCAGCAGCTTCATCGCCTGCAGCGAGATCGACGATGTCTATTTCGACAAGCCCTATTATCTCGCCCCCGCCGGCCACGATGCCGATGAGGCCTTTGCGCTCATCCGCGACGGCATGAGCAAGCGCCAGGTGGCGGCGCTGGCGCAGACCGTATTGTTCCGCCGCGTCCGCACCGTGCTGATCCGGCCGCATGGCAAGGGCCTCATCGCCACGACGCTCAATTACGACTACGAAGTGCGCTCCGCCGACGCCGCATTCGAGGATGTGCCCGATTTCAAGCTCAAGGGCGAAATGCTGGAGCTGGCGGAACACATCATCAAGACCAAGCGTGGCAGCTTCGATCCCGCCAAATTCGACGACCGTTACGAGGCGGCGCTGGCCGATCTGGTCAAGGCCAAGCTCGAAGGGCGCAAGATCGAAAAGCGTCCACCGCCCAAGGACGACAAGGTGGTCGATCTCATGGCCGCCTTGCGAGAAAGCGCTGGCATTTCCGCCAAAAAGACCAGAAAAGCCGCGCCCGCCAAAAGGGCCGCTGCCAAGTCCAAAGCCGCATCACTGCGCAAAAAGGCCAGCTGA
PROTEIN sequence
Length: 286
VAPRANWKGFLKVAELTCPVALYTAASTSDRIAFHTLNRATGHRVRRQFVDSDTGKPVERDDQVKGYEVGSGEYITLDPETVAAAVPDSDKTLDISSFIACSEIDDVYFDKPYYLAPAGHDADEAFALIRDGMSKRQVAALAQTVLFRRVRTVLIRPHGKGLIATTLNYDYEVRSADAAFEDVPDFKLKGEMLELAEHIIKTKRGSFDPAKFDDRYEAALADLVKAKLEGRKIEKRPPPKDDKVVDLMAALRESAGISAKKTRKAAPAKRAAAKSKAASLRKKAS*