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scnpilot_p_inoc_scaffold_3173

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_3173_1
Asticcacaulis sp. AC466, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..1034
DNA (1032bp) protein (344aa)
Uncharacterized protein n=1 Tax=Asticcacaulis sp. AC466 RepID=V4NIU8_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:ESQ81762.1}; TaxID=1282362 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis s
hypothetical protein
scnpilot_p_inoc_scaffold_3173_2
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1065..1511)
DNA (447bp) protein (149aa)
id=2593120 bin=GWF1_Rhodobacteraceae_65_7 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
id=2593120 Tax=GWF1_Rhodobacteraceae_65_7_curated
scnpilot_p_inoc_scaffold_3173_3
Ochrobactrum sp. CDB2, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1521..2993)
DNA (1473bp) protein (491aa)
Uncharacterized protein n=1 Tax=Ochrobactrum sp. CDB2 RepID=M3KCB6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EMG52484.1}; TaxID=360313 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. CDB2.;"
hypothetical protein
scnpilot_p_inoc_scaffold_3173_4
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3270..4127
DNA (858bp) protein (286aa)
Probable DNA repair protein NGR_b04720 n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3KPC6_RHISN rbh
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; TaxID=394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinor
Ku78, Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen
scnpilot_p_inoc_scaffold_3173_5
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4130..6676
DNA (2547bp) protein (849aa)
ykoU2; ATP-dependent DNA ligase YkoU (EC:6.5.1.1)
UPI0003CFFAC9 related cluster n=1 Tax=unknown RepID=UPI0003CFFAC9 rbh
DNA ligase D {ECO:0000313|EMBL:ESZ14378.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00
scnpilot_p_inoc_scaffold_3173_6
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6910..7716)
DNA (807bp) protein (269aa)
UPI0003D02C75 related cluster n=1 Tax=unknown RepID=UPI0003D02C75 rbh
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source=
Ku78, Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen
scnpilot_p_inoc_scaffold_3173_7
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7771..8766)
DNA (996bp) protein (332aa)
Transcriptional regulator n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z2U6_9RHIZ rbh
LacI family transcriptional regulator {ECO:0000313|EMBL:KKB09274.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chi
cytR; HTH-type transcriptional repressor CytR
scnpilot_p_inoc_scaffold_3173_8
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8906..9688
DNA (783bp) protein (261aa)
6-phosphogluconolactonase/glucosamine-6-phosphate isomerase/deaminase n=1 Tax=Rhizobium sp. CF080 RepID=J3CBZ1_9RHIZ rbh
Glucosamine-6-phosphate deaminase {ECO:0000313|EMBL:KKB10273.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhat
Glucosamine-6-phosphate deaminase rbh
scnpilot_p_inoc_scaffold_3173_9
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9681..10349
DNA (669bp) protein (223aa)
sugar isomerase n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI00036C9010 rbh
Sugar isomerase {ECO:0000313|EMBL:KKB09275.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
UPF0309 protein
Displaying 9 items

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