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scnpilot_p_inoc_scaffold_3173_6

Organism: SCNpilot_P_inoc_Devosia_62_4

partial RP 38 / 55 BSCG 38 / 51 ASCG 9 / 38
Location: comp(6910..7716)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003D02C75 related cluster n=1 Tax=unknown RepID=UPI0003D02C75 similarity UNIREF
DB: UNIREF100
  • Identity: 78.7
  • Coverage: 267.0
  • Bit_score: 418
  • Evalue 6.90e-114
  • rbh
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source= similarity UNIPROT
DB: UniProtKB
  • Identity: 78.7
  • Coverage: 267.0
  • Bit_score: 418
  • Evalue 9.60e-114
Ku78, Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen similarity KEGG
DB: KEGG
  • Identity: 75.8
  • Coverage: 269.0
  • Bit_score: 411
  • Evalue 1.40e-112

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Taxonomy

Mesorhizobium sp. L48C026A00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 807
ATGGCACCACGCTCGTTCTGGAAAGGCTATCTCAAACTTTCGCTGGTCACCTGTCCGGTCGCGATGACGCCGGCTACATCGGACAGCGAGAAGGTGCGGTTCCACACGCTCAACGCCAAGACCGGCAATCGCGTGGTCAGCCAATATGTCGATGCGGTGTCCGCCAAGCCGGTCGACAAGGATGACGAGGTCAAAGGCTATCAGCGCGGCGAAGACGACTACGTCATGCTCGAAGACGACGAGATCGATGCGGTAGCGCTGGAAAGCACGCGCACCATCGATATCGAGAGCTTTGTGTCGCGCGATAGCATCGAGTGGATCTGGTACGACACGCCGCATTATCTGGCGCCCAACGATCCGGTGGGCGAAGAGGCCTTTGCGGTGATCCGCGAGGCGATGGCGACGACCGGCACGGTGGGGATTTCCCGGCTGGTGATGTATCGGCGCGAGCGCGCGGTGATGCTGGAGCCGCGGGGCAAGGGCATCGTGCTGTGGACGCTGCGCTATGGCGATGAAGTGCGGGACGAGGCCGACTATTTTGCCGGCATAGGCAGCGGCAAGTCCGACGCCAAGCTGATGACGATGGTCACCAAACTGATCGACGCGCGCACCACCGCATGGGACCCGAAGATGGTCGATGACCCGGTGCAGGACAAGCTGCTCGATATCATCGCCGCCAAGAAGAAGGGTAAGCGCATCGCCAAGCCCAAGCAGAGCGCGGAAGAACCGGCCAGCAATGTCATCAATATCATGGACGCGCTGCGCAAAAGCATCGGGGCGGAGACGGGCAAGACGCGGTCGCGATAG
PROTEIN sequence
Length: 269
MAPRSFWKGYLKLSLVTCPVAMTPATSDSEKVRFHTLNAKTGNRVVSQYVDAVSAKPVDKDDEVKGYQRGEDDYVMLEDDEIDAVALESTRTIDIESFVSRDSIEWIWYDTPHYLAPNDPVGEEAFAVIREAMATTGTVGISRLVMYRRERAVMLEPRGKGIVLWTLRYGDEVRDEADYFAGIGSGKSDAKLMTMVTKLIDARTTAWDPKMVDDPVQDKLLDIIAAKKKGKRIAKPKQSAEEPASNVINIMDALRKSIGAETGKTRSR*