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scnpilot_p_inoc_scaffold_3479_6

Organism: SCNpilot_P_inoc_Devosia_62_4

partial RP 38 / 55 BSCG 38 / 51 ASCG 9 / 38
Location: 4282..4806

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor, ECF subfamily n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R7F8_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 64.9
  • Coverage: 171.0
  • Bit_score: 218
  • Evalue 6.80e-54
RNA polymerase sigma70 {ECO:0000313|EMBL:KKB08210.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.7
  • Coverage: 172.0
  • Bit_score: 298
  • Evalue 7.20e-78
ECF subfamily RNA polymerase sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 64.9
  • Coverage: 171.0
  • Bit_score: 218
  • Evalue 1.90e-54

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Taxonomy

Devosia chinhatensis → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 525
ATGCGCACGCTGATGCTGGCGGCGCTGGATGGCGATGCGGTCGCCTATCGCGCACTGCTGTCCGAATTGACCCGCTATCTGCGCCCCTGGTTTGCCCGCCGCCTCACCCCCGCCCATGCCGCGCACGCGGAGGATCTCGTGCAGGAGACATTGCTGGCCGTGCACACCAAGCGGCACACCTATGACCGAACCCGTCCGTTTACCGCCTGGCTGCACGCTGTGGCGCACCACAAATTCGTCGATCACATCCGCCGCTATGCCATCCGTCCAACCGTGCCGCTCGACGACGATGCCCCGATCTTCGCCCCGGACAGGGCGACGGACAGCGCTGATCGACATGATGTCGAAGTCGCCCTGGCGCTGGTACCGGGGCGCACCGCAGACCTCATTCGCCAGACCCGGCTGGAAGGCGCCACGGTGGCCGAGGCGGCCGCCCTGCACAATATGAGCGAGACCGCCGCCAAGGTGTCGATCCACCGCGGCCTCAAATCGCTGATGCAGAAATTTGCGGGGGGCGGAAAATGA
PROTEIN sequence
Length: 175
MRTLMLAALDGDAVAYRALLSELTRYLRPWFARRLTPAHAAHAEDLVQETLLAVHTKRHTYDRTRPFTAWLHAVAHHKFVDHIRRYAIRPTVPLDDDAPIFAPDRATDSADRHDVEVALALVPGRTADLIRQTRLEGATVAEAAALHNMSETAAKVSIHRGLKSLMQKFAGGGK*