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scnpilot_p_inoc_scaffold_3479

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_3479_1
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..1328)
DNA (1326bp) protein (442aa)
DEAD/DEAH box helicase n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MFP4_9RHIZ rbh
DEAD/DEAH box helicase domain protein {ECO:0000313|EMBL:KFC61647.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp
DEAD/DEAH box helicase
scnpilot_p_inoc_scaffold_3479_2
unknown

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comp(1605..2003)
DNA (399bp) protein (133aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_3479_3
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2086..2877)
DNA (792bp) protein (264aa)
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI00037E8234 rbh
Molybdopterin oxidoreductase {ECO:0000313|EMBL:KKB80217.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
sulfite oxidase and related enzymes
scnpilot_p_inoc_scaffold_3479_4
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2874..3722)
DNA (849bp) protein (283aa)
Thiosulfate reductase cytochrome B subunit (Membrane anchoring protein) n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R7F6_PELHB rbh
HupC {ECO:0000313|EMBL:KKB07282.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
thiosulfate reductase cytochrome B subunit
scnpilot_p_inoc_scaffold_3479_5
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3808..4095)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R7F7_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB07283.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
scnpilot_p_inoc_scaffold_3479_6
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4282..4806
DNA (525bp) protein (175aa)
RNA polymerase sigma-70 factor, ECF subfamily n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R7F8_PELHB
RNA polymerase sigma70 {ECO:0000313|EMBL:KKB08210.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
ECF subfamily RNA polymerase sigma-70 factor
scnpilot_p_inoc_scaffold_3479_7
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4803..5441
DNA (639bp) protein (213aa)
Extracytoplasmic function alternative sigma factor n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R7F9_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL28354.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
extracytoplasmic function alternative sigma factor
scnpilot_p_inoc_scaffold_3479_8
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5448..6098)
DNA (651bp) protein (217aa)
Uncharacterized protein n=6 Tax=Rhizobium meliloti RepID=F6E3Z3_SINMK
Uncharacterized protein {ECO:0000313|EMBL:KFL28353.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
scnpilot_p_inoc_scaffold_3479_9
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6344..7951
DNA (1608bp) protein (536aa)
5'-nucleotidase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R7G1_PELHB rbh
5'-nucleotidase {ECO:0000313|EMBL:KKB07286.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
5'-nucleotidase
scnpilot_p_inoc_scaffold_3479_10
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7996..8463)
DNA (468bp) protein (156aa)
Response regulator receiver protein n=1 Tax=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) RepID=B1ZEF4_METPB
Uncharacterized protein {ECO:0000313|EMBL:KKB07287.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
response regulator receiver protein
scnpilot_p_inoc_scaffold_3479_11
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8597..8992
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Phyllobacterium sp. YR531 RepID=J3HSE9_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFC72310.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
scnpilot_p_inoc_scaffold_3479_12
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9063..9314)
DNA (252bp) protein (84aa)
Transglycosylase-associated protein n=1 Tax=Rhodobacter sphaeroides WS8N RepID=F3U3Q2_RHOSH
Membrane protein {ECO:0000313|EMBL:KKB85338.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
Transglycosylase-associated protein
scnpilot_p_inoc_scaffold_3479_13
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9432..9701)
DNA (270bp) protein (90aa)
Putative dehydrogenase n=1 Tax=Phyllobacterium sp. YR531 RepID=J2UXR9_9RHIZ
Oxidoreductase {ECO:0000313|EMBL:KFL28347.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
oxidoreductase protein
Displaying 13 items

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