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scnpilot_p_inoc_scaffold_3304

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_3304_1
RifOxyA12_full_Lentisphaerae_48_11_curated, Lentisphaerae, Bacteria

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comp(125..1651)
-----------------
DNA (1527bp)
protein (509aa)
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001745E71 rbh
hypothetical protein Tax=RifOxyA12_full_Lentisphaerae_48_11_curated
hypothetical protein
scnpilot_p_inoc_scaffold_3304_2

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comp(1774..3045)
-----------------
DNA (1272bp)
protein (424aa)
Uncharacterized protein n=1 Tax=Rhodopirellula europaea SH398 RepID=M5S6H7_9PLAN rbh
Marine sediment metagenome DNA, contig: S01H1_L01022 {ECO:0000313|EMBL:GAF73688.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
scnpilot_p_inoc_scaffold_3304_3
Sphingobacterium sp. ML3W, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(3684..4283)
-----------------
DNA (600bp)
protein (200aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y4T9_9SPHI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIM36839.1}; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobac
scnpilot_p_inoc_scaffold_3304_4
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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comp(4584..5645)
-----------------
DNA (1062bp)
protein (354aa)
L-threonine aldolase; K01620 threonine aldolase [EC:4.1.2.5] Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003600108
L-threonine aldolase
scnpilot_p_inoc_scaffold_3304_5
unknown

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comp(5735..5866)
-----------------
DNA (132bp)
protein (44aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_3304_6
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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5935..6792
-----------------
DNA (858bp)
protein (286aa)
RNA polymerase, sigma 70 subunit, RpoD subfamily n=1 Tax=Niabella soli DSM 19437 RepID=H1NPV4_9SPHI
RNA polymerase sigma factor rpoD
RNA polymerase sigma factor rpoD {ECO:0000313|EMBL:AHF14910.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli
scnpilot_p_inoc_scaffold_3304_7
unknown

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6926..7132
-----------------
DNA (207bp)
protein (69aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_3304_8
unknown

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7147..7278
-----------------
DNA (132bp)
protein (44aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_3304_9
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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7346..8293
-----------------
DNA (948bp)
protein (316aa)
Thioredoxin reductase {ECO:0000313|EMBL:AEV97289.1}; EC=1.8.1.9 {ECO:0000313|EMBL:AEV97289.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; N
Thioredoxin reductase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TE98_NIAKG rbh
thioredoxin reductase
scnpilot_p_inoc_scaffold_3304_10
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

8354..8713
-----------------
DNA (360bp)
protein (120aa)
folB; dihydroneopterin aldolase (EC:4.1.2.25); K01633 dihydroneopterin aldolase [EC:4.1.2.25] Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Dihydroneopterin aldolase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TE99_NIAKG
dihydroneopterin aldolase
scnpilot_p_inoc_scaffold_3304_11
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

8710..9462
-----------------
DNA (753bp)
protein (251aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036FDDCC
hypothetical protein Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
hypothetical protein
scnpilot_p_inoc_scaffold_3304_12
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9564..10100
-----------------
DNA (537bp)
protein (179aa)
Aminopeptidase {ECO:0000313|EMBL:CDS91336.1}; EC=3.4.11.- {ECO:0000313|EMBL:CDS91336.1};; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphi
Uncharacterized protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2G2N1_9SPHI
peptidase M1
Displaying 12 items

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