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scnpilot_p_inoc_scaffold_3569

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_3569_1
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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1..804
DNA (804bp) protein (268aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035C16EB rbh
Inner membrane transport protein yjjL {ECO:0000313|EMBL:CCH51115.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.
Inner membrane transport protein yjjL
scnpilot_p_inoc_scaffold_3569_2
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(811..1140)
DNA (330bp) protein (110aa)
Export-related chaperone CsaA n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PG21_CHIPD
chaperone CsaA
Export-related chaperone CsaA {ECO:0000313|EMBL:ACU58004.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga
scnpilot_p_inoc_scaffold_3569_3
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1278..2042)
DNA (765bp) protein (255aa)
methyltransferase n=1 Tax=Cytophagales str. B6 RepID=UPI0003B33BBC rbh
methyltransferase
Methyltransferase {ECO:0000313|EMBL:AHF15010.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
scnpilot_p_inoc_scaffold_3569_4
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2265..2564
DNA (300bp) protein (100aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5ITV6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGJ99199.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BA
scnpilot_p_inoc_scaffold_3569_5
Sphingobacterium paucimobilis, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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2634..2999
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Sphingobacterium paucimobilis HER1398 RepID=U2JB00_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:ERJ59843.1}; TaxID=1346330 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobac
hypothetical protein
scnpilot_p_inoc_scaffold_3569_6
Sphingobacterium paucimobilis, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2986..3558
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Sphingobacterium paucimobilis HER1398 RepID=U2JB69_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:ERJ59913.1}; TaxID=1346330 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobac
ECF subfamily RNA polymerase sigma-24 subunit
scnpilot_p_inoc_scaffold_3569_7
Flavobacterium reichenbachii, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(3601..4704)
DNA (1104bp) protein (368aa)
aminotransferase class I/II n=1 Tax=Flavobacterium sp. WG21 RepID=UPI00034DB81A rbh
Aminotransferase class I/II {ECO:0000313|EMBL:KFF05118.1}; TaxID=362418 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium
class I and II aminotransferase
scnpilot_p_inoc_scaffold_3569_8
unknown

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4843..4962
DNA (120bp) protein (40aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_3569_9
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


5062..5367
DNA (306bp) protein (102aa)
30S ribosomal protein S10 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNL4_NIAKG
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihum
30S ribosomal protein S10
scnpilot_p_inoc_scaffold_3569_10
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


5717..6307
DNA (591bp) protein (197aa)
50S ribosomal protein L3 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMF7_NIAKG
50S ribosomal protein L3
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niaste
scnpilot_p_inoc_scaffold_3569_11
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


6358..6996
DNA (639bp) protein (213aa)
50S ribosomal protein L4 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PU72_CHIPD
50S ribosomal protein L4
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga
scnpilot_p_inoc_scaffold_3569_12
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


7065..7364
DNA (300bp) protein (100aa)
50S ribosomal protein L23 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMF5_NIAKG
50S ribosomal protein L23
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koree
scnpilot_p_inoc_scaffold_3569_13
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


7419..8255
DNA (837bp) protein (279aa)
50S ribosomal protein L2 n=1 Tax=Segetibacter koreensis RepID=UPI00036B96DE
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumi
50S ribosomal protein L2
scnpilot_p_inoc_scaffold_3569_14
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


8334..8606
DNA (273bp) protein (91aa)
30S ribosomal protein S19 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMF3_NIAKG
30S ribosomal protein S19
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koree
scnpilot_p_inoc_scaffold_3569_15
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists


8670..9014
DNA (345bp) protein (115aa)
50S ribosomal protein L22 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMF2_NIAKG
50S ribosomal protein L22; K02890 large subunit ribosomal protein L22 Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
50S ribosomal protein L22
scnpilot_p_inoc_scaffold_3569_16
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


9038..9544
DNA (507bp) protein (169aa)
30S ribosomal protein S3 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMF1_NIAKG
30S ribosomal protein S3
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreen
Displaying 16 items

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