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scnpilot_p_inoc_scaffold_1224

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1224_1
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(1..786)
DNA (786bp) protein (262aa)
Putative uncharacterized protein n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MCS9_PARUW rbh
Thiol reductant ABC exporter, CydC subunit {ECO:0000313|EMBL:CDZ80624.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="
hypothetical protein
scnpilot_p_inoc_scaffold_1224_2
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(932..1261)
DNA (330bp) protein (110aa)
Putative membrane protein n=2 Tax=Waddlia chondrophila RepID=D6YWB8_WADCW
Transmembrane proteins 14C {ECO:0000313|EMBL:CDZ80625.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'R
hypothetical protein
scnpilot_p_inoc_scaffold_1224_3
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(1258..2466)
DNA (1209bp) protein (403aa)
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PR82_CHIPD
Putative esterase {ECO:0000313|EMBL:CDZ80626.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
methyltransferase GidB
scnpilot_p_inoc_scaffold_1224_4
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2436..3560)
DNA (1125bp) protein (375aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003804194
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:AEW01696.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koree
scnpilot_p_inoc_scaffold_1224_5
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3630..3986
DNA (357bp) protein (119aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzym
Queuine tRNA-ribosyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TH85_NIAKG
tRNA-guanine transglycosylase
scnpilot_p_inoc_scaffold_1224_6
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3973..4677
DNA (705bp) protein (235aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzym
Queuine tRNA-ribosyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TH85_NIAKG
tRNA-guanine transglycosylase
scnpilot_p_inoc_scaffold_1224_7
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

4749..5933
DNA (1185bp) protein (395aa)
acyl-CoA dehydrogenase n=1 Tax=Segetibacter koreensis RepID=UPI0003656A3F
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:KIC89323.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter
glutaryl-CoA dehydrogenase
scnpilot_p_inoc_scaffold_1224_8
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5941..6447
DNA (507bp) protein (169aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingob
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000375DF14
shikimate kinase
scnpilot_p_inoc_scaffold_1224_9
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6440..6865
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJQ3_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW00800.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Ni
scnpilot_p_inoc_scaffold_1224_10
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6998..8911)
DNA (1914bp) protein (638aa)
Putative signal transduction histidine kinase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJQ2_NIAKG
putative signal transduction histidine kinase
Putative signal transduction histidine kinase {ECO:0000313|EMBL:AEW00799.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; N
scnpilot_p_inoc_scaffold_1224_11
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9024..11528
DNA (2505bp) protein (835aa)
Cell division FtsK/SpoIIIE n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJQ1_NIAKG
Cell division protein FtsK {ECO:0000313|EMBL:KIC93262.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumiba
cell division protein FtsK
scnpilot_p_inoc_scaffold_1224_12
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11528..12307
DNA (780bp) protein (260aa)
Outer membrane lipoprotein carrier protein LolA n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PIA8_CHIPD
Uncharacterized protein {ECO:0000313|EMBL:KIC89318.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
outer membrane lipoprotein carrier protein LolA
scnpilot_p_inoc_scaffold_1224_13
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12493..12966)
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIF8_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIC92901.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
hypothetical protein
scnpilot_p_inoc_scaffold_1224_14
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

13181..13525
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIF5_NIAKG
hypothetical protein; K06929 Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
hypothetical protein
scnpilot_p_inoc_scaffold_1224_15
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13631..14194
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQT4_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIC93149.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
hypothetical protein
scnpilot_p_inoc_scaffold_1224_16
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14360..14638
DNA (279bp) protein (93aa)
UPF0102 protein Niako_0418 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQT2_NIAKG
hypothetical protein
UPF0102 protein Niako_0418 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella kore
scnpilot_p_inoc_scaffold_1224_17
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(14616..15134)
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQT1_NIAKG
hypothetical protein; K06940 Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
hypothetical protein
scnpilot_p_inoc_scaffold_1224_18
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15177..16076
DNA (900bp) protein (300aa)
integrase n=1 Tax=Segetibacter koreensis RepID=UPI00035DD63D
Tyrosine recombinase xerC
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koree
scnpilot_p_inoc_scaffold_1224_19
unknown

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16563..17366
DNA (804bp) protein (268aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1224_20
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17492..18802)
DNA (1311bp) protein (437aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TE27_NIAKG rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW03575.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (
scnpilot_p_inoc_scaffold_1224_21
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(18843..19880)
DNA (1038bp) protein (346aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003815188
Fe(3+)-transporting ATPase Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
ABC transporter ATP-binding protein
scnpilot_p_inoc_scaffold_1224_22
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19950..21518)
DNA (1569bp) protein (523aa)
Monooxygenase FAD-binding protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TE30_NIAKG
monooxygenase FAD-binding protein
Monooxygenase FAD-binding protein {ECO:0000313|EMBL:AEW03578.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella k
scnpilot_p_inoc_scaffold_1224_23
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(21561..21971)
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003681497
hypothetical protein Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
hypothetical protein
scnpilot_p_inoc_scaffold_1224_24
unknown

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22058..22291
DNA (234bp) protein (78aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1224_25
unknown

Not on your lists

comp(22288..22428)
DNA (141bp) protein (47aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1224_26
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

22449..23882
DNA (1434bp) protein (478aa)
chromosomal replication initiation protein n=1 Tax=Niabella aurantiaca RepID=UPI00036C1649
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; C
chromosomal replication initiator protein DnaA
scnpilot_p_inoc_scaffold_1224_27
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

23898..24227
DNA (330bp) protein (110aa)
acylphosphatase; K01512 acylphosphatase [EC:3.6.1.7] id=14425630 bin=bin1_lowGC species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin1_lowGC organism_group=Unknown_CP
acylphosphatase; K01512 acylphosphatase [EC:3.6.1.7] Tax=CSP1_2_Dadabacteria
acylphosphatase
scnpilot_p_inoc_scaffold_1224_28
unknown

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24619..24735
DNA (117bp) protein (39aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1224_29
unknown

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24677..24808
DNA (132bp) protein (44aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1224_30
Chloroherpeton thalassium, Chloroherpeton, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

comp(24812..25645)
DNA (834bp) protein (278aa)
O-methyltransferase domain protein n=1 Tax=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) RepID=B3QXT4_CHLT3 rbh
O-methyltransferase domain-containing protein
O-methyltransferase domain protein {ECO:0000313|EMBL:ACF13462.1}; TaxID=517418 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chloroherpeton.;" source="Chloroherpeton thalassium
Displaying items 1-30 of 31 in total

View Taxonomy