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scnpilot_p_inoc_scaffold_1412

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1412_1
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

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1..939
DNA (939bp) protein (313aa)
Putative uncharacterized protein id=2003870 bin=GWE2_Bacteroidetes_42_39 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
Putative uncharacterized protein Tax=GWE2_Bacteroidetes_42_39_curated
scnpilot_p_inoc_scaffold_1412_2
Cyclobacterium marinum, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

1023..3380
DNA (2358bp) protein (786aa)
Glycoside hydrolase family 29 (Alpha-L-fucosidase) n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0J631_CYCMS rbh
glycoside hydrolase
Glycoside hydrolase family 29 (Alpha-L-fucosidase) {ECO:0000313|EMBL:AEL26094.1}; Flags: Precursor;; TaxID=880070 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cycloba
scnpilot_p_inoc_scaffold_1412_3
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3404..5056
DNA (1653bp) protein (551aa)
SSS sodium solute transporter superfamily n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y953_9SPHI
SSS sodium solute transporter superfamily {ECO:0000313|EMBL:EHQ29091.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" s
SSS sodium solute transporter superfamily protein
scnpilot_p_inoc_scaffold_1412_4
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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5191..5514
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6EB82_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:KIA93588.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyung
hypothetical protein
scnpilot_p_inoc_scaffold_1412_5
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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5526..7532
DNA (2007bp) protein (669aa)
Uncharacterized protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GS82_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:CCH56760.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1412_6
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

7529..8911
DNA (1383bp) protein (461aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PL86_CHIPD
iron-sulfur cluster binding protein Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
hypothetical protein
scnpilot_p_inoc_scaffold_1412_7
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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8908..9624
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PUX2_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU62881.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinen
scnpilot_p_inoc_scaffold_1412_8
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9627..10529)
DNA (903bp) protein (301aa)
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:AEV97361.1}; EC=1.1.1.133 {ECO:0000313|EMBL:AEV97361.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitin
dTDP-4-dehydrorhamnose reductase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGD8_NIAKG rbh
dTDP-4-dehydrorhamnose reductase
scnpilot_p_inoc_scaffold_1412_9
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10722..11708
DNA (987bp) protein (329aa)
ATP-dependent 6-phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339}; Short=ATP-PFK {ECO:0000256|HAMAP-Rule:MF_00339};; Short=Phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339};; EC=2.7.1.11 {ECO:
6-phosphofructokinase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGD7_NIAKG rbh
6-phosphofructokinase
scnpilot_p_inoc_scaffold_1412_10
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11744..13234
DNA (1491bp) protein (497aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Ni
Pyruvate kinase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGD6_NIAKG
pyruvate kinase
scnpilot_p_inoc_scaffold_1412_11
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13429..14307
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T829_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV97980.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (
scnpilot_p_inoc_scaffold_1412_12
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14317..14703
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TBW7_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV99260.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Ni
scnpilot_p_inoc_scaffold_1412_13
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14741..15514
DNA (774bp) protein (258aa)
Phospholipid/glycerol acyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TBW6_NIAKG
phospholipid/glycerol acyltransferase
Phospholipid/glycerol acyltransferase {ECO:0000313|EMBL:AEV99259.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella
scnpilot_p_inoc_scaffold_1412_14
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15525..15938)
DNA (414bp) protein (138aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169,
3-dehydroquinate dehydratase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TI95_NIAKG
3-dehydroquinate dehydratase
scnpilot_p_inoc_scaffold_1412_15
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16022..17122)
DNA (1101bp) protein (367aa)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_012
Carbamoyl-phosphate synthase small chain n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TI96_NIAKG
carbamoyl-phosphate synthase small subunit
scnpilot_p_inoc_scaffold_1412_16
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists


comp(17262..17801)
DNA (540bp) protein (180aa)
50S ribosomal protein L17 n=1 Tax=Niabella aurantiaca RepID=UPI0003620FBB
50S ribosomal protein L17P; K02879 large subunit ribosomal protein L17 Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
50S ribosomal protein L17
scnpilot_p_inoc_scaffold_1412_17
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17944..18945)
DNA (1002bp) protein (334aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase
DNA-directed RNA polymerase subunit alpha n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TI98_NIAKG
DNA-directed RNA polymerase subunit alpha
scnpilot_p_inoc_scaffold_1412_18
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(19051..19656)
DNA (606bp) protein (202aa)
30S ribosomal protein S4 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TI99_NIAKG rbh
30S ribosomal protein S4 rbh
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreen
scnpilot_p_inoc_scaffold_1412_19
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(19777..20181)
DNA (405bp) protein (135aa)
30S ribosomal protein S11 n=1 Tax=Niabella aurantiaca RepID=UPI00036DE442
30S ribosomal protein S11
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DS
scnpilot_p_inoc_scaffold_1412_20
BJP_08E140C01_Anaerolineales_40_8, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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comp(20263..20643)
DNA (381bp) protein (127aa)
30S ribosomal protein S13 id=1722542 bin=GWB2_Chloroflexi_54_36 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
rpsM; 30S ribosomal protein S13
Tax=BJP_08E140C01_Anaerolineales_40_8
scnpilot_p_inoc_scaffold_1412_21
BJP_08E140C01_Anaerolineales_40_8, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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comp(20810..21289)
DNA (480bp) protein (160aa)
map; methionine aminopeptidase (EC:3.4.11.18)
Methionine aminopeptidase n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N3P6_ANATU
Tax=BJP_08E140C01_Anaerolineales_40_8
Displaying 21 items

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