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scnpilot_p_inoc_scaffold_1474

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1474_1
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1..405
DNA (405bp) protein (135aa)
RagB/SusD domain-containing protein n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C1Y7_SPHS2
RagB/SusD domain-containing protein
RagB/SusD domain-containing protein {ECO:0000313|EMBL:ADZ79487.1}; Flags: Precursor;; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingob
scnpilot_p_inoc_scaffold_1474_2
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(554..2620)
DNA (2067bp) protein (689aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacte
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003817E86 rbh
membrane protease FtsH catalytic subunit
scnpilot_p_inoc_scaffold_1474_3
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(2717..3118)
DNA (402bp) protein (134aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000367A469
iojap family protein
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitin
scnpilot_p_inoc_scaffold_1474_4
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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3261..4001
DNA (741bp) protein (247aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000366A2CF
biotin--acetyl-CoA-carboxylase ligase
Biotin/acetyl-CoA-carboxylase ligase {ECO:0000313|EMBL:AEW01999.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastell
scnpilot_p_inoc_scaffold_1474_5
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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4037..4693
DNA (657bp) protein (219aa)
Peptidase S16 lon domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGD2_NIAKG rbh
peptidase S16 lon domain-containing protein
Peptidase S16 lon domain protein {ECO:0000313|EMBL:AEW02771.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella ko
scnpilot_p_inoc_scaffold_1474_6
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(4773..6422)
DNA (1650bp) protein (550aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=700598 specie
Transcription termination factor Rho n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TF35_NIAKG rbh
transcription termination factor Rho
scnpilot_p_inoc_scaffold_1474_7
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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6781..8217
DNA (1437bp) protein (479aa)
Asparagine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453}; EC=6.1.1.22 {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453};; Asparaginyl-tRNA synthetase {EC
Asparagine--tRNA ligase n=1 Tax=Niabella soli DSM 19437 RepID=H1NTZ3_9SPHI
asparaginyl-tRNA synthetase
scnpilot_p_inoc_scaffold_1474_8
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(8299..9144)
DNA (846bp) protein (282aa)
UspA domain-containing protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TF23_NIAKG
UspA domain-containing protein
UspA domain-containing protein {ECO:0000313|EMBL:AEW02643.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella kore
scnpilot_p_inoc_scaffold_1474_9
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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9193..10176
DNA (984bp) protein (328aa)
2OG-Fe(II) oxygenase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TF25_NIAKG rbh
2OG-Fe(II) oxygenase
2OG-Fe(II) oxygenase {ECO:0000313|EMBL:AEW02645.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (str
scnpilot_p_inoc_scaffold_1474_10
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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10227..11483
DNA (1257bp) protein (419aa)
Chromate transporter, chromate ion transporter (CHR) family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCL5_NIAKG
chromate ion transporter family chromate transporter
Chromate transporter, chromate ion transporter (CHR) family {ECO:0000313|EMBL:AEW02555.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chiti
scnpilot_p_inoc_scaffold_1474_11
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11582..12154)
DNA (573bp) protein (191aa)
Probable nicotinate-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; EC=2.7.7.18 {ECO:0000256|HAMAP-Rule:MF_00244};; Deamido-NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00244};
Probable nicotinate-nucleotide adenylyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCL7_NIAKG
nicotinate-nucleotide adenylyltransferase
scnpilot_p_inoc_scaffold_1474_12
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12171..12395)
DNA (225bp) protein (75aa)
FeoA family protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCL8_NIAKG
Iron transporter {ECO:0000313|EMBL:KIC90972.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. Z
FeoA family protein
scnpilot_p_inoc_scaffold_1474_13
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12464..12886
DNA (423bp) protein (141aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophag
Endoribonuclease YbeY n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PIQ5_CHIPD
hypothetical protein
scnpilot_p_inoc_scaffold_1474_14
Microscilla marina, Microscilla, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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12895..13569
DNA (675bp) protein (225aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003747168
Allergen V5/Tpx-1 related {ECO:0000313|EMBL:EAY28470.1}; TaxID=313606 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Microscilla.;" source="Microscilla marina ATCC 23134.;"
SCP-like extracellular
scnpilot_p_inoc_scaffold_1474_15
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13618..15486
DNA (1869bp) protein (623aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCM2_NIAKG
tRNA uridine 5-carboxymethylaminomethyl modification protein MnmG
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=700598 species="Bacter
scnpilot_p_inoc_scaffold_1474_16
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15564..16574)
DNA (1011bp) protein (337aa)
Quinolinate synthase A {ECO:0000256|HAMAP-Rule:MF_00568}; EC=2.5.1.72 {ECO:0000256|HAMAP-Rule:MF_00568, ECO:0000256|SAAS:SAAS00096027};; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacterii
quinolinate synthetase n=1 Tax=Niabella aurantiaca RepID=UPI00035DF476
quinolinate synthetase
scnpilot_p_inoc_scaffold_1474_17
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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17143..19266
DNA (2124bp) protein (708aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophag
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035C7892 rbh
PpiC-type peptidyl-prolyl cis-trans isomerase
scnpilot_p_inoc_scaffold_1474_18
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

19525..20046
DNA (522bp) protein (174aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003632F13
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02567.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (
scnpilot_p_inoc_scaffold_1474_19
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(20076..20252)
DNA (177bp) protein (59aa)
ligand-binding protein SH3 n=1 Tax=Aquimarina agarilytica RepID=UPI000287BCD6
two component transcriptional regulator, LuxR family
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:AEW02009.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;"
Displaying 19 items

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