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scnpilot_p_inoc_scaffold_1714

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1714_1
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(3..944)
DNA (942bp) protein (314aa)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit bet
ATP synthase subunit beta n=1 Tax=Niabella soli DSM 19437 RepID=H1NS11_9SPHI
F0F1 ATP synthase subunit beta
scnpilot_p_inoc_scaffold_1714_2
Nitrosomonas sp. AL212, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1673..2386)
DNA (714bp) protein (238aa)
Major intrinsic protein n=1 Tax=Nitrosomonas sp. AL212 RepID=F9ZJW6_9PROT rbh
major intrinsic protein
Major intrinsic protein {ECO:0000313|EMBL:ADZ26502.1}; TaxID=153948 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas sp.
scnpilot_p_inoc_scaffold_1714_3
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(2589..3824)
DNA (1236bp) protein (412aa)
Ornithine aminotransferase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PDZ2_CHIPD
ornithine aminotransferase
Ornithine aminotransferase {ECO:0000313|EMBL:ACU61492.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pi
scnpilot_p_inoc_scaffold_1714_4
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(4274..5158)
DNA (885bp) protein (295aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:M
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035D0163
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
scnpilot_p_inoc_scaffold_1714_5
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(5127..5723)
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TDG7_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIC91639.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
scnpilot_p_inoc_scaffold_1714_6
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(5834..6802)
DNA (969bp) protein (323aa)
Electron transfer flavoprotein alpha subunit apoprotein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TDG6_NIAKG
electron transfer flavoprotein alpha subunit apoprotein
Electron transfer flavoprotein alpha subunit apoprotein {ECO:0000313|EMBL:AEW00416.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.
scnpilot_p_inoc_scaffold_1714_7
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(6837..7628)
DNA (792bp) protein (264aa)
Electron transfer flavoprotein beta subunit n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TDG5_NIAKG rbh
electron transfer flavoprotein subunit beta
Electron transfer flavoprotein beta subunit {ECO:0000313|EMBL:AEW00415.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="N
scnpilot_p_inoc_scaffold_1714_8
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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7693..8007
DNA (315bp) protein (105aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000361A0EF
hypothetical protein Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
hypothetical protein
scnpilot_p_inoc_scaffold_1714_9
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8029..9408
DNA (1380bp) protein (460aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003664644
tRNA(Ile)-lysidine synthetase
scnpilot_p_inoc_scaffold_1714_10
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9405..10049)
DNA (645bp) protein (215aa)
Peptidase S54, rhomboid domain n=1 Tax=Niabella soli DSM 19437 RepID=H1NPL3_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:KIC91645.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
protease
scnpilot_p_inoc_scaffold_1714_11
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(10108..10581)
DNA (474bp) protein (158aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP
Ribosomal RNA large subunit methyltransferase H n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9R6_NIAKG
ribosomal RNA large subunit methyltransferase H
scnpilot_p_inoc_scaffold_1714_12
Lacinutrix sp. 5H-3-7-4, Lacinutrix, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10586..11644)
DNA (1059bp) protein (353aa)
Uncharacterized protein n=1 Tax=Lacinutrix sp. (strain 5H-3-7-4) RepID=F6GG50_LACS5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH00887.1}; TaxID=983544 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Lacinutrix.;" source="Lacinutrix sp. (strain
scnpilot_p_inoc_scaffold_1714_13
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(11669..12742)
DNA (1074bp) protein (358aa)
Glycosyltransferase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CTT9_9CLOT
putative lipopolysaccharide biosynthesis protein
Lipopolysaccharide biosynthesis protein {ECO:0000313|EMBL:KIA88515.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="C
scnpilot_p_inoc_scaffold_1714_14
Thauera terpenica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12764..14020)
DNA (1257bp) protein (419aa)
Uncharacterized protein n=1 Tax=Thauera terpenica 58Eu RepID=S9ZI73_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:EPZ17075.1}; TaxID=1348657 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera terpenica 58Eu.;"
scnpilot_p_inoc_scaffold_1714_15
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(14086..16518)
DNA (2433bp) protein (811aa)
epsB; capsular exopolysaccharide family (EC:2.7.10.2)
Capsular exopolysaccharide family {ECO:0000313|EMBL:CCG98809.1}; EC=2.7.10.2 {ECO:0000313|EMBL:CCG98809.1};; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fi
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI00037BA708
scnpilot_p_inoc_scaffold_1714_16
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(16525..17295)
DNA (771bp) protein (257aa)
Soluble ligand binding domain n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C899_SPHS2
sugar transporter
Sugar transporter {ECO:0000313|EMBL:AKD01939.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
Displaying 16 items

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