ggKbase home page

scnpilot_p_inoc_scaffold_1917

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1917_1
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3..203
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK13_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02951.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (
scnpilot_p_inoc_scaffold_1917_2
RLO_Nitrospinae_45_22, Nitrospinae, Bacteria

Not on your lists

264..674
DNA (411bp) protein (137aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_45_22_curated
hypothetical protein id=14425146 bin=bin1_lowGC species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
scnpilot_p_inoc_scaffold_1917_3
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

738..1847
DNA (1110bp) protein (370aa)
Radical SAM domain protein n=1 Tax=Niabella soli DSM 19437 PF8_9SPHI">RepID=H1NPF8_9SPHI rbh
radical SAM protein
Radical SAM protein {ECO:0000313|EMBL:AHF15019.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
scnpilot_p_inoc_scaffold_1917_4
unknown

Not on your lists

1871..2038
DNA (168bp) protein (56aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1917_5
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

2103..2651
DNA (549bp) protein (183aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000368D503
Iron-sulfur cluster assembly protein HesB {ECO:0000313|EMBL:GAL86001.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophag
iron-sulfur cluster assembly protein HesB
scnpilot_p_inoc_scaffold_1917_6
Chryseobacterium sp. P1-3, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

2663..2872
DNA (210bp) protein (70aa)
hypothetical protein n=1 Tax=Acinetobacter sp. P8-3-8 RepID=UPI0002487142
Uncharacterized protein {ECO:0000313|EMBL:KFF73276.1}; TaxID=1517683 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium
hypothetical protein
scnpilot_p_inoc_scaffold_1917_7
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2973..4262)
DNA (1290bp) protein (430aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000382E1ED
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIC96046.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
scnpilot_p_inoc_scaffold_1917_8
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4558..5292)
DNA (735bp) protein (245aa)
DNA repair protein RecO n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMI5_NIAKG
DNA replication and repair protein RecO
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphi
scnpilot_p_inoc_scaffold_1917_9
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5422..6654)
DNA (1233bp) protein (411aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQE6_NIAKG
ATP-dependent Clp protease ATP-binding subunit ClpX
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriale
scnpilot_p_inoc_scaffold_1917_10
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6866..7492)
DNA (627bp) protein (209aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopep
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00035E46CA
Clp protease proteolytic subunit ClpP
scnpilot_p_inoc_scaffold_1917_11
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7527..8219)
DNA (693bp) protein (231aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444};; Endopeptidase Clp {ECO:0000256|HAMAP-R
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQE8_NIAKG
ATP-dependent Clp protease proteolytic subunit ClpP
scnpilot_p_inoc_scaffold_1917_12
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8526..9914)
DNA (1389bp) protein (463aa)
Trigger factor n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJU1_NIAKG
Trigger factor {ECO:0000313|EMBL:AEW01839.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DS
trigger factor
scnpilot_p_inoc_scaffold_1917_13
BJP_08E140C01_Flavobacteriales_35_8, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

10392..11948
DNA (1557bp) protein (519aa)
Polysaccharide biosynthesis protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VUM4_DYAFD rbh
polysaccharide biosynthesis protein rbh
Tax=BJP_08E140C01_Flavobacteriales_35_8
scnpilot_p_inoc_scaffold_1917_14
Rivularia sp. PCC 7116, Rivularia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

11951..13351
DNA (1401bp) protein (467aa)
hypothetical protein n=1 Tax=Fischerella muscicola RepID=UPI00031959F2 rbh
coenzyme F420-reducing hydrogenase subunit beta rbh
Coenzyme F420-reducing hydrogenase, beta subunit {ECO:0000313|EMBL:AFY53083.1}; TaxID=373994 species="Bacteria; Cyanobacteria; Nostocales; Rivulariaceae; Rivularia.;" source="Rivularia sp. PCC 7116.;"
scnpilot_p_inoc_scaffold_1917_15
Bacteroides sp. CAG:661, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13355..14503
DNA (1149bp) protein (383aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:661 RepID=R5SN97_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ48176.1}; TaxID=1262746 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bactero
hypothetical protein
scnpilot_p_inoc_scaffold_1917_16
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14500..15471
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5YSN2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN17177.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae
glycosyltransferase
Displaying 16 items

View Taxonomy