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scnpilot_p_inoc_scaffold_1956

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1956_1
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(3..1883)
DNA (1881bp) protein (627aa)
alpha-L-rhamnosidase (EC:3.2.1.40)
Alpha-L-rhamnosidase {ECO:0000313|EMBL:CCH02681.1}; EC=3.2.1.40 {ECO:0000313|EMBL:CCH02681.1};; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" sou
Alpha-L-rhamnosidase n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0KEX8_9BACT
scnpilot_p_inoc_scaffold_1956_2
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(2033..3109)
DNA (1077bp) protein (359aa)
Glycerol-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU000439}; EC=1.1.1.94 {ECO:0000256|RuleBase:RU000439};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; C
Glycerol-3-phosphate dehydrogenase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMP8_NIAKG
glycerol-3-phosphate dehydrogenase
scnpilot_p_inoc_scaffold_1956_3
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(3170..4573)
DNA (1404bp) protein (468aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMP7_NIAKG rbh
RND family efflux transporter MFP subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:AEW03068.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Nia
scnpilot_p_inoc_scaffold_1956_4
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(4599..6062)
DNA (1464bp) protein (488aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00037B77C5
Putative efflux pump outer membrane protein {ECO:0000313|EMBL:GAO45134.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" so
outer membrane efflux protein
scnpilot_p_inoc_scaffold_1956_5
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(6163..7323)
DNA (1161bp) protein (387aa)
Cystathionine beta-lyase {ECO:0000313|EMBL:AEW03066.1}; EC=4.4.1.8 {ECO:0000313|EMBL:AEW03066.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae
Cystathionine beta-lyase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMP5_NIAKG rbh
Cystathionine beta-lyase
scnpilot_p_inoc_scaffold_1956_6
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(7604..8077)
DNA (474bp) protein (158aa)
ferritin Dps family protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003745098
Putative DNA-binding protein {ECO:0000313|EMBL:GAO43943.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumi
ferritin Dps family protein
scnpilot_p_inoc_scaffold_1956_7
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(8288..10909)
DNA (2622bp) protein (874aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256
alanyl-tRNA synthetase n=1 Tax=Niabella aurantiaca RepID=UPI00037DF87B
alanyl-tRNA synthetase
scnpilot_p_inoc_scaffold_1956_8
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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11052..12023
DNA (972bp) protein (324aa)
Peptidase M23 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMH2_NIAKG rbh
Peptidase M23 {ECO:0000313|EMBL:KIC89684.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG62
peptidase M23
scnpilot_p_inoc_scaffold_1956_9
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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12077..12682
DNA (606bp) protein (202aa)
Regulatory protein MerR n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMK1_NIAKG
regulatory protein MerR
Regulatory protein MerR {ECO:0000313|EMBL:AEW01989.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (
scnpilot_p_inoc_scaffold_1956_10
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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12860..13456
DNA (597bp) protein (199aa)
ErfK/YbiS/YcfS/YnhG family protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIN5_NIAKG
ErfK/YbiS/YcfS/YnhG family protein
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:AEW02888.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;"
scnpilot_p_inoc_scaffold_1956_11
Hymenobacter swuensis, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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13825..15006
DNA (1182bp) protein (394aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:AHJ99639.1}; EC=3.5.1.28 {ECO:0000313|EMBL:AHJ99639.1};; TaxID=1227739 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; H
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036EC15A rbh
scnpilot_p_inoc_scaffold_1956_12
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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15019..15336
DNA (318bp) protein (106aa)
stress protein n=1 Tax=Sphingomonas wittichii RepID=UPI000306F3C0
stress responsive alpha-beta barrel domain-containing protein
Stress responsive alpha-beta barrel domain protein {ECO:0000313|EMBL:ABQ67992.1}; Flags: Precursor;; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonad
Displaying 12 items

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