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scnpilot_p_inoc_scaffold_2336

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_2336_1
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(3..416)
DNA (414bp) protein (138aa)
glucose-methanol-choline oxidoreductase, partial n=1 Tax=Pedobacter agri RepID=UPI000299DF69
GMC family oxidoreductase {ECO:0000313|EMBL:KIA94249.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyu
glucose-methanol-choline oxidoreductase
scnpilot_p_inoc_scaffold_2336_2
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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623..1273
DNA (651bp) protein (217aa)
Two component transcriptional regulator, LytTR family n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PH96_CHIPD
LytTR family two component transcriptional regulator
Two component transcriptional regulator, LytTR family {ECO:0000313|EMBL:ACU58075.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga
scnpilot_p_inoc_scaffold_2336_3
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1765..3957
DNA (2193bp) protein (731aa)
Histidine kinase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PH97_CHIPD
histidine kinase
Histidine kinase {ECO:0000313|EMBL:ACU58076.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitin
scnpilot_p_inoc_scaffold_2336_4
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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3954..4826
DNA (873bp) protein (291aa)
S-adenosyl-L-methionine-dependent methyltransferase {ECO:0000256|RuleBase:RU362030}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362030};; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphin
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035F7B04 rbh
methyltransferase
scnpilot_p_inoc_scaffold_2336_5

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comp(4968..5327)
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035D0174
Biopolymer transport protein ExbD/TolR {ECO:0000313|EMBL:AIA18620.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
biopolymer transport protein ExbD/TolR
scnpilot_p_inoc_scaffold_2336_6
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(5410..6111)
DNA (702bp) protein (234aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000368F1BB rbh
Biopolymer transporter ExbB {ECO:0000313|EMBL:KIC89350.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumib
outer membrane transport energization protein ExbB
scnpilot_p_inoc_scaffold_2336_7
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(6517..7035)
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGE8_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:GAO44305.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
hypothetical protein
scnpilot_p_inoc_scaffold_2336_8
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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comp(7180..7677)
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037BC515
transcriptional regulator, AsnC family Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
AsnC family transcriptional regulator
scnpilot_p_inoc_scaffold_2336_9
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7811..9139
DNA (1329bp) protein (443aa)
Adenosylhomocysteinase {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548}; EC=3.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548};; S-adenosyl-L-homocysteine hydrola
Adenosylhomocysteinase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIZ6_NIAKG
adenosylhomocysteinase
scnpilot_p_inoc_scaffold_2336_10
Flavobacterium sp. F52, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(9326..9853)
DNA (528bp) protein (176aa)
Blue (Type1) copper domain-containing protein n=1 Tax=Flavobacterium sp. F52 RepID=J0S4E7_9FLAO
Blue (Type1) copper domain-containing protein {ECO:0000313|EMBL:EJG02925.1}; TaxID=1202532 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" sour
blue (type1) copper domain-containing protein
scnpilot_p_inoc_scaffold_2336_11
unknown

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comp(10404..10883)
DNA (480bp) protein (160aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_2336_12
Maribacter sp. HTCC2170, Maribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(10951..12255)
DNA (1305bp) protein (435aa)
Putative uncharacterized protein n=1 Tax=Maribacter sp. (strain HTCC2170 / KCCM 42371) RepID=A4ANB5_MARSH rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EAR02487.1}; TaxID=313603 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Maribacter.;" source="Maribacter sp. (strain
scnpilot_p_inoc_scaffold_2336_13
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12442..13245
DNA (804bp) protein (268aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000366867D rbh
sulfatase
Sulfatase {ECO:0000313|EMBL:ACU60085.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga
Displaying 13 items

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