ggKbase home page

scnpilot_p_inoc_scaffold_2135_6

Organism: SCNpilot_P_inoc_Sphingobacteriales_44_4_partial

near complete RP 42 / 55 MC: 2 BSCG 41 / 51 MC: 2 ASCG 9 / 38 MC: 1
Location: 6145..9732

Top 3 Functional Annotations

Value Algorithm Source
SusC/RagA family TonB-linked outer membrane protein n=2 Tax=Parabacteroides RepID=K6AHB9_9PORP similarity UNIREF
DB: UNIREF100
  • Identity: 54.9
  • Coverage: 999.99
  • Bit_score: 1363
  • Evalue 0.0
  • rbh
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EKN22970.1}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" sou similarity UNIPROT
DB: UniProtKB
  • Identity: 54.9
  • Coverage: 999.99
  • Bit_score: 1363
  • Evalue 0.0
TonB-dependent receptor plug similarity KEGG
DB: KEGG
  • Identity: 53.3
  • Coverage: 999.99
  • Bit_score: 1291
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Parabacteroides distasonis → Parabacteroides → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 3588
ATGAACTTAAAAGCCAATTACCGGCGCGTGTTTATCACAAAAACACTGGTGATTATGAAAACGGTAACCCTTCTGCTTTTTACGGCCTGTCTTACTGCCAGCGCCGGCGGACTGGCGCAAAGAGTGACCTTATCCGAAAATAATGTGAAGCTGGATAAGGTCTTTAAAGAGATCAAGAAACAAACAGGCTATGTTTTCTTCTATGACGCGCGTGTTCTTGAAGGAACAAAGAGCGTGAGCGTGCATGTAAGGGATGAAACGGTTGAGGGAGTATTATACCAAATCTTCCTTGAGCAGCCGCTTGATTACTCCATACTCCGAAAAACGATCACTATTGTCAGGAAGATCAATGCCCGTTCATCTGCGGCTACTTTAAATGCTTCTAACATCCCCCCGGAAGCTGTTCCGGCGGCAACGATTTCTGGCATCGTAAAAGATGCACAGGGCAGCCCGCTTGCCGGTGTATCCATAATCATAAAAGGAAGCCAGAAAGGTACAACCACGGGTGTAGACGGCAGCTTTTCTATTGAAGCTAATGAAGGAGATGTACTTGAGTTTACTATTATAGGATACCAGAAAACAAGTGTGACGGTGGCTCACAAAAAAGATCTGATAGTGGTGCTGGAAATAGAAGCCTCAATAGCCAGTGAAGTAGTGGTGGTTGGATATGGAACACAAAAAAAAGCGAACCTGACCGGGGCTGTTGAACAGGTAAGCGGCGATGTGCTTGATAACAGGCCGATGCCCAATCTGACGCAGGGGTTGCAGGGAGTCATTCCCAATTTAAATATTTCCCTGGCAGATGGTAAACCCACAAGAAGCTCAGCCTACCAGGTTCGTGGGGTTTCTTCTATTGGTCAGGGCGGAAGTGCGCTGGTGCTCATTGACGGCGTGGAAGGGGATCCTGCTATGCTCAACCCCAATGATATTGCCAGCGTTTCCGTGCTCAAAGATGCCGGATCTGCAGCAATTTACGGCGCCCGTGGCGCCTTTGGGGTGGTGCTGATTACCACAAAAAATCCCCGTAAAGGGCGTACTTCAATTACTTATAGTAACAATTTTGCGGTAAAATCCCCGACGGTGGTACCCGATATGGTCACCGACTCCTATGTATATGCCAATATGTTTGTGGAAGCATATTCATCTTATTATGATTATGCAAGAACCCCAACGACTTTCCATACGGCAGTACCCTATTCGCAGGACTGGCATAATGAGATGGCAAACAGGCGCCCAGGATCCGGAAAGCCGGAGGTAGAAGTGGACGGCAGTGGCAATTACCAATATTATGCAAATACAGATTGGTACGGTTTATTATATAAAAACCATACGCTTGGCAGTGACCATAATATTTCTATACAGGGAGGTGGGGAAAAAACTAATTTCTGGATTTCCGGCAGATATTATGGTCAGGATGGGCTTTTTAATTATAAAAGCGATGATTATTCGATGCTCAATCTGCGTGTAAAAGGATCGGCTCAAATATTCAGCTGGCTCAAAGTTGAGAACAACACAGATATATCGAAGATGGGTTATTATAACCCAATATCAGTAGGCAGCGGAAACTTCTGGTATGGATTGGAAGGTGAAGCAGAACCAATGAGCCCGATGTTCAATCCCGACGGAACCCTTACCATGGGTGCAGCTTATAGTGTGGGAGATCTCTGGTATGGCAAAAGCGGCACCAATACGGAAAAACGCTTGCTGCGCAATACTACCTCATTTTCAACCTCTTTCCTGAATAATACATTTCGGATAAAAGGTGATATTACATTCCGTAACACAGATAATATTGATGCAACAAGGCGAGTGCCTGTTCCATATAGTAAACAGGTAGGGGTGATATCCTATCTTGGTTCTTCTACTAATGACTACGGAGAAGGACATTCGGGCACAAAATATCTGGCCACAAATATTTATGGCGAGTACGAACGAACCTTCAGCAAGGATCATGATTTTAAGGCAATGCTCGGCTATAATTACGAACAGTCTGAATACAACACGATATTCAGCCGGAGGAACGGGATTCTGTTTACTGATGTATCCAATATAAATTTGACAAGCGGTAGTGGGGTTGAGATTTCCAGTGATTATGAAAGATGGAGAATAGCCGGCGGGTTTTCGAGATTAAACTACGCTTTTAAAGGGCGTTATTTACTTGAGTTGAACGGGCGGCTGGATGGCTCTACAAAGTTTCCGGTAAACCAGCAATGGGGATTCTTTCCGTCTGTTTCTGCAGGCTGGCGTGTCTCTAAAGAGTCGTTCTGGAAAGTGAGCGATAAAATAGTTTCAGATCTAAAACTTAGATTCTCGTATGGCTCTTTGGGGAATGGCACTATTGGTTCATATAAATTCCAGGAATTATTCGGTATAACTCAGATGTCGCGTCTGATCAGCGGGCAGTTAAACCAACAAACATCTTCCCCCGGCGTTATCCCGGACGGGCTGACATGGGAAAAATCTACAACATCAAATATAGGTCTCGATTTTTCGTCGTTAGAAGGCAGGCTGAATTTTTCGGGTGACGCATATATTCGAAAGACCTCCGATATGTTTGCAGTTGGTATAGACCTGCCTGCTGTTTTTGGCGCCACACCTCCCAAAGGAAATTATGCCGACATGACCACAAGGGGGTGGGAAGTTACACTTCGCTGGCACGACCAGTTTGCACTGGCAAGTAAACCGTTCAATTATAACATACGGGTTACCATGGCAGACTACCTGTCAAAAATTGGAAAATACAGCAATGAAGAAAAAAGCCTGGGGTCTTACTTCGATGCCCGCTTTAATTATTATGGAGGGATGACCCTCGGCGAAATATGGGGATACGAAACAGAGGGATTTTTTACTTCTGAGGAAGATATACAAAACCATGCATCTCAAAAGTTATATTTTGCTTCTAATTCAGGAACATGGTTGCCTGGCGATATCAAATTTAAGGACCTTAATCATGATGGTGTTATTAATTACGGCACCAACAAAGTCGGAGATCCCGGCGACAGAAGGATCATCGGCAATACCACTCCCCGTTACACTTATGGTATTAGTGTAGGGGCTGACTGGAACGGCATCTTTTTTTCAGCATTCTTCCAGGGCGTGGGAAAACAGGACTGGTGGCCCGGGACCGACAATGCATTATTCTGGGGGCAATATAGCCGGCCTTACAGCAATGTCCCGTCTTCCATGATCGGGAATATATGGTCGGAAGATAATCCCAATGCTTATTTCCCCCGGTATCGGGGCTATGTGGCTTTGCAAAGCTCCCGCGAGTTATCTGTAGTGCAGACACGGTATCTGCAGAACGTAGCCTATATCCGTTTAAAGAATTTGCAGGTTGGATACAACCTCCCCGCTTCACTGATATCCGCTGTAAAAATGCAGAATGCCCGTGTTTATGTTTCAACAGAAAACCTCTGGGCATGGTCTCCATTATATAAGCACACTAAAAACTTCGATGTTGCCGGTATTTATGGACAGGATAGTGATGCCGCAAGTGCGATGGGCAATTCCGGGATAGATAATGGCAGCCAGGTATATAATTATCCGCTACTGAAGAGCATCAGTGTTGGATTATCGGTAACATTTTAA
PROTEIN sequence
Length: 1196
MNLKANYRRVFITKTLVIMKTVTLLLFTACLTASAGGLAQRVTLSENNVKLDKVFKEIKKQTGYVFFYDARVLEGTKSVSVHVRDETVEGVLYQIFLEQPLDYSILRKTITIVRKINARSSAATLNASNIPPEAVPAATISGIVKDAQGSPLAGVSIIIKGSQKGTTTGVDGSFSIEANEGDVLEFTIIGYQKTSVTVAHKKDLIVVLEIEASIASEVVVVGYGTQKKANLTGAVEQVSGDVLDNRPMPNLTQGLQGVIPNLNISLADGKPTRSSAYQVRGVSSIGQGGSALVLIDGVEGDPAMLNPNDIASVSVLKDAGSAAIYGARGAFGVVLITTKNPRKGRTSITYSNNFAVKSPTVVPDMVTDSYVYANMFVEAYSSYYDYARTPTTFHTAVPYSQDWHNEMANRRPGSGKPEVEVDGSGNYQYYANTDWYGLLYKNHTLGSDHNISIQGGGEKTNFWISGRYYGQDGLFNYKSDDYSMLNLRVKGSAQIFSWLKVENNTDISKMGYYNPISVGSGNFWYGLEGEAEPMSPMFNPDGTLTMGAAYSVGDLWYGKSGTNTEKRLLRNTTSFSTSFLNNTFRIKGDITFRNTDNIDATRRVPVPYSKQVGVISYLGSSTNDYGEGHSGTKYLATNIYGEYERTFSKDHDFKAMLGYNYEQSEYNTIFSRRNGILFTDVSNINLTSGSGVEISSDYERWRIAGGFSRLNYAFKGRYLLELNGRLDGSTKFPVNQQWGFFPSVSAGWRVSKESFWKVSDKIVSDLKLRFSYGSLGNGTIGSYKFQELFGITQMSRLISGQLNQQTSSPGVIPDGLTWEKSTTSNIGLDFSSLEGRLNFSGDAYIRKTSDMFAVGIDLPAVFGATPPKGNYADMTTRGWEVTLRWHDQFALASKPFNYNIRVTMADYLSKIGKYSNEEKSLGSYFDARFNYYGGMTLGEIWGYETEGFFTSEEDIQNHASQKLYFASNSGTWLPGDIKFKDLNHDGVINYGTNKVGDPGDRRIIGNTTPRYTYGISVGADWNGIFFSAFFQGVGKQDWWPGTDNALFWGQYSRPYSNVPSSMIGNIWSEDNPNAYFPRYRGYVALQSSRELSVVQTRYLQNVAYIRLKNLQVGYNLPASLISAVKMQNARVYVSTENLWAWSPLYKHTKNFDVAGIYGQDSDAASAMGNSGIDNGSQVYNYPLLKSISVGLSVTF*