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scnpilot_p_inoc_scaffold_2135

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_2135_1
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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21..1580
DNA (1560bp) protein (520aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chiti
UvrD/REP helicase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PMH5_CHIPD
UvrD/REP helicase
scnpilot_p_inoc_scaffold_2135_2
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1589..2599
DNA (1011bp) protein (337aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036B5E72
FAD dependent oxidoreductase
FAD dependent oxidoreductase {ECO:0000313|EMBL:AEV96535.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreen
scnpilot_p_inoc_scaffold_2135_3
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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2945..4045
DNA (1101bp) protein (367aa)
Uncharacterized protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KPV0_SOLCM
hypothetical protein (DUF2891)
Uncharacterized protein {ECO:0000313|EMBL:AFD05998.1}; Flags: Precursor;; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source=
scnpilot_p_inoc_scaffold_2135_4
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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4138..4713
DNA (576bp) protein (192aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7R6_NIAKG
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEW03360.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" sourc
scnpilot_p_inoc_scaffold_2135_5
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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4782..5930
DNA (1149bp) protein (383aa)
Anti-FecI sigma factor, FecR n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7R7_NIAKG rbh
Putative anti-sigma factor {ECO:0000313|EMBL:GAO43369.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumiba
anti-FecI sigma factor FecR
scnpilot_p_inoc_scaffold_2135_6
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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6145..9732
DNA (3588bp) protein (1196aa)
SusC/RagA family TonB-linked outer membrane protein n=2 Tax=Parabacteroides RepID=K6AHB9_9PORP rbh
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EKN22970.1}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" sou
TonB-dependent receptor plug
scnpilot_p_inoc_scaffold_2135_7
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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9745..11502
DNA (1758bp) protein (586aa)
Putative outer membrane protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6EBR0_9SPHI
Starch-binding protein {ECO:0000313|EMBL:ETZ21641.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48
RagB/SusD domain-containing protein
scnpilot_p_inoc_scaffold_2135_8
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(11591..12853)
DNA (1263bp) protein (421aa)
Putative uncharacterized protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XWZ6_PEDHD rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU04290.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter hepari
scnpilot_p_inoc_scaffold_2135_9
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(13046..13882)
DNA (837bp) protein (279aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000377011C rbh
Xylose isomerase domain protein TIM barrel {ECO:0000313|EMBL:CCH55840.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi B
sugar phosphate isomerase
scnpilot_p_inoc_scaffold_2135_10
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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13951..14217
DNA (267bp) protein (89aa)
YjgF family translation initiation inhibitor n=1 Tax=Spirosoma spitsbergense RepID=UPI00037CA02F
endoribonuclease L-PSP
Endoribonuclease L-PSP {ECO:0000313|EMBL:ACU64402.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinens
Displaying 10 items

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