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scnpilot_p_inoc_scaffold_1969_14

Organism: SCNpilot_P_inoc_Sphingobacteriales_44_4_partial

near complete RP 42 / 55 MC: 2 BSCG 41 / 51 MC: 2 ASCG 9 / 38 MC: 1
Location: comp(14501..15085)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix domain protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EGS6_RUNSL similarity UNIREF
DB: UNIREF100
  • Identity: 55.8
  • Coverage: 190.0
  • Bit_score: 225
  • Evalue 4.70e-56
XRE family transcriptional regulator {ECO:0000313|EMBL:KIC95442.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="F similarity UNIPROT
DB: UniProtKB
  • Identity: 71.0
  • Coverage: 193.0
  • Bit_score: 267
  • Evalue 1.50e-68
helix-turn-helix domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 55.8
  • Coverage: 190.0
  • Bit_score: 225
  • Evalue 1.30e-56

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Taxonomy

Flavihumibacter solisilvae → Flavihumibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 585
ATGCAGGAAGACATCCTTATACAAATAAGCAATAAAATAAAAGAAACCCGCAAAGCCCAGAAAAAGACCGTTCAGGAATTGGCCACTGAGGCGCAGGTAAGCAAGGGGCTTATCTCGCAAATTGAAAATAACCGTACGGTACCCTCTCTTCCCGTGCTCATGAATATTGTGCTGGCGCTGAGCATAGACCTCAAGGATTTTTTTGAGGATATCAGCCATAACCGGGAAAGCAAGCAGAAGATCATTATCAAGTCGAAAAAAGATTACCTGCCCTTTGAAAAAGAGGTTGCCAAAGGCTTTAAATACAAAAGGATACTGACGCGCAATATGGACGGAGGTCCGGTAGATACCGTGCTGCTCGAATTAAAAAAGGGGGCTAAGCGCGCCCATATGATCAAAACAGATGCCTACGAATATAAATATGTGATCCGGGGAAAAGTAGAGTACCATATTGAAAACGAGAAATATGTAATAGAAGAAGGTGATTCCCTCTTTTTTGACGGCCGGCTTCCCCATAAGCCTGCTAATATCGGCGATACTGACGCCCTTATGCTCGTGGTATATTTCTTTATCACAGAGCGGTAA
PROTEIN sequence
Length: 195
MQEDILIQISNKIKETRKAQKKTVQELATEAQVSKGLISQIENNRTVPSLPVLMNIVLALSIDLKDFFEDISHNRESKQKIIIKSKKDYLPFEKEVAKGFKYKRILTRNMDGGPVDTVLLELKKGAKRAHMIKTDAYEYKYVIRGKVEYHIENEKYVIEEGDSLFFDGRLPHKPANIGDTDALMLVVYFFITER*