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scnpilot_p_inoc_scaffold_1969

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1969_1
unknown

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68..250
DNA (183bp) protein (61aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1969_2
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(393..911)
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TFC0_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:ETZ23987.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V4
hypothetical protein
scnpilot_p_inoc_scaffold_1969_3
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(959..1684)
DNA (726bp) protein (242aa)
Pyridoxine 5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00279, ECO:0000256|SAAS:SAAS00088558}; Short=PNP synthase {ECO:0000256|HAMAP-Rule:MF_00279};; EC=2.6.99.2 {ECO:0000256|HAMAP-Rule:MF_00279,
pyridoxamine 5''''-phosphate oxidase n=1 Tax=Niabella aurantiaca RepID=UPI00037ADC78 rbh
pyridoxamine 5'-phosphate oxidase
scnpilot_p_inoc_scaffold_1969_4
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1836..3143
DNA (1308bp) protein (436aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035DA2E0 rbh
Contig28, whole genome shotgun sequence {ECO:0000313|EMBL:KIO77884.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="
hypothetical protein
scnpilot_p_inoc_scaffold_1969_5
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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3170..4273
DNA (1104bp) protein (368aa)
2-aminoethylphosphonate--pyruvate transaminase {ECO:0000256|HAMAP-Rule:MF_01376, ECO:0000256|SAAS:SAAS00009569}; EC=2.6.1.37 {ECO:0000256|HAMAP-Rule:MF_01376, ECO:0000256|SAAS:SAAS00009569};; 2-aminoe
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035F847E rbh
2-aminoethylphosphonate--pyruvate transaminase
scnpilot_p_inoc_scaffold_1969_6

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4291..6021
DNA (1731bp) protein (577aa)
dihydroxy-acid dehydratase (EC:4.2.1.9)
dihydroxy-acid dehydratase n=1 Tax=Segetibacter koreensis RepID=UPI00037C4112 rbh
Dehydratase family {ECO:0000313|EMBL:AIA14391.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
scnpilot_p_inoc_scaffold_1969_7
Treponema vincentii, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(6057..7445)
DNA (1389bp) protein (463aa)
hypothetical protein n=1 Tax=filamentous cyanobacterium ESFC-1 RepID=UPI000376AFF9 rbh
Uncharacterized protein {ECO:0000313|EMBL:EPF45814.1}; TaxID=1125702 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema vincentii F0403.;"
polysaccharide deacetylase
scnpilot_p_inoc_scaffold_1969_8
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(7458..8738)
DNA (1281bp) protein (427aa)
polysaccharide biosynthesis protein n=1 Tax=Mesoflavibacter zeaxanthinifaciens RepID=UPI000255ACDE rbh
O-antigen translocase Tax=GWF2_Bacteroidetes_33_38_curated
polysaccharide biosynthesis protein
scnpilot_p_inoc_scaffold_1969_9
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8958..9731
DNA (774bp) protein (258aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000372744D
Short-chain dehydrogenase {ECO:0000313|EMBL:KIC95182.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibac
3-oxoacyl-ACP reductase
scnpilot_p_inoc_scaffold_1969_10
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9740..10525)
DNA (786bp) protein (262aa)
3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TKX8_NIAKG rbh
Short-chain dehydrogenase {ECO:0000313|EMBL:KIC93269.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibac
3-oxoacyl-(acyl-carrier-protein) reductase
scnpilot_p_inoc_scaffold_1969_11
Pedobacter sp. BAL39, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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10584..11498
DNA (915bp) protein (305aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036F7DE1 rbh
Predicted xylanase/chitin deacetilase {ECO:0000313|EMBL:EDM35302.1}; TaxID=391596 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Ped
polysaccharide deacetylase
scnpilot_p_inoc_scaffold_1969_12
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11638..13050)
DNA (1413bp) protein (471aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037BE091 rbh
Putative aldehyde dehydrogenase {ECO:0000313|EMBL:GAO44625.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavih
aldehyde dehydrogenase
scnpilot_p_inoc_scaffold_1969_13
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13071..14318)
DNA (1248bp) protein (416aa)
phnA; phosphonoacetate hydrolase; 2-phosphonopropionate hydrolase (EC:3.11.1.2)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036993A4 rbh
Phosphonoacetate hydrolase {ECO:0000313|EMBL:GAO44624.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumiba
scnpilot_p_inoc_scaffold_1969_14
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14501..15085)
DNA (585bp) protein (195aa)
Helix-turn-helix domain protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EGS6_RUNSL
XRE family transcriptional regulator {ECO:0000313|EMBL:KIC95442.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="F
helix-turn-helix domain-containing protein
Displaying 14 items

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