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scnpilot_p_inoc_scaffold_2398_9

Organism: SCNpilot_P_inoc_Sphingobacteriales_44_4_partial

near complete RP 42 / 55 MC: 2 BSCG 41 / 51 MC: 2 ASCG 9 / 38 MC: 1
Location: 6828..7280

Top 3 Functional Annotations

Value Algorithm Source
Ribosome maturation factor RimM n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQL0_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 54.7
  • Coverage: 150.0
  • Bit_score: 184
  • Evalue 7.20e-44
16S rRNA processing protein RimM similarity KEGG
DB: KEGG
  • Identity: 54.7
  • Coverage: 150.0
  • Bit_score: 184
  • Evalue 2.00e-44
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00055369}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; similarity UNIPROT
DB: UniProtKB
  • Identity: 54.7
  • Coverage: 150.0
  • Bit_score: 184
  • Evalue 1.00e-43

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Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 453
ATGATCCTGCAGCACAGCCTTGGGAAAAAAAATACGTTCAAAGGCGTGCAGGCTATCTTTATTGAACATCCCCAAAATACCTTCCTCCCTTATTTTGTAGAAGACGGCCGCATAAAAAGCGACCAGGAAACCTATGTTAAAATCGAAGCCGTGCACTCCCGTGAAAACGCCCGTAAACTGCTGCAGAAAGAAATATGGCTGACAGCGGAAGATTTTGAGAAATGTGCCGGGAAATCGTCTCCCATATCAGTTCTGGGATACCATGTGATCCATAATGATGAAGATCTCGGAGAGATCAATGAAGTGATAGAACAACCACATCAATTGCTATGCAGCATCAGCCTTCGCGGGAAAGAAGTACTGATCCCCCTGCACGAGGAAACTTTGAAGCAGATTGATAATAAAGCAAAAAAAATATACGTTATTCTTCCGGACGGTCTGCTGGATTTATGA
PROTEIN sequence
Length: 151
MILQHSLGKKNTFKGVQAIFIEHPQNTFLPYFVEDGRIKSDQETYVKIEAVHSRENARKLLQKEIWLTAEDFEKCAGKSSPISVLGYHVIHNDEDLGEINEVIEQPHQLLCSISLRGKEVLIPLHEETLKQIDNKAKKIYVILPDGLLDL*