ggKbase home page

scnpilot_p_inoc_scaffold_2398

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_2398_1
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1..522)
DNA (522bp) protein (174aa)
Beta-Ala-His dipeptidase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQK2_NIAKG
Beta-Ala-His dipeptidase
Peptidase dimerization domain protein {ECO:0000313|EMBL:KIC95333.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="
scnpilot_p_inoc_scaffold_2398_2
unknown

Not on your lists

592..876
DNA (285bp) protein (95aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_2398_3
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(827..2374)
DNA (1548bp) protein (516aa)
permease YjgP/YjgQ family protein id=4211782 bin=GWF2_Bacteroidetes_35_48 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81 rbh
putative permease Tax=GWF2_Bacteroidetes_35_48_curated
YjgP/YjgQ family permease
scnpilot_p_inoc_scaffold_2398_4
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2420..3019
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQK5_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW03252.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (
scnpilot_p_inoc_scaffold_2398_5
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3020..3400)
DNA (381bp) protein (127aa)
Activator of HSP90 ATPase 1 family protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQK6_NIAKG
activator of HSP90 ATPase 1 family protein
Activator of HSP90 ATPase 1 family protein {ECO:0000313|EMBL:AEW03253.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Ni
scnpilot_p_inoc_scaffold_2398_6
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3687..4562
DNA (876bp) protein (292aa)
RNA polymerase, sigma 70 subunit, RpoD subfamily n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQK7_NIAKG
RNA polymerase sigma factor rpoD {ECO:0000313|EMBL:KIC95338.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavi
RpoD subfamily RNA polymerase sigma-70 subunit
scnpilot_p_inoc_scaffold_2398_7
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


4682..6001
DNA (1320bp) protein (440aa)
signal recognition particle n=1 Tax=Segetibacter koreensis RepID=UPI000364F953 rbh
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingoba
signal recognition particle subunit FFH/SRP54 (srp54)
scnpilot_p_inoc_scaffold_2398_8
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


6109..6543
DNA (435bp) protein (145aa)
30S ribosomal protein S16 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQK9_NIAKG
30S ribosomal protein S16
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koree
scnpilot_p_inoc_scaffold_2398_9
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6828..7280
DNA (453bp) protein (151aa)
Ribosome maturation factor RimM n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQL0_NIAKG
16S rRNA processing protein RimM
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00055369}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae;
scnpilot_p_inoc_scaffold_2398_10
unknown

Not on your lists

7338..7487
DNA (150bp) protein (50aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_2398_11
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7446..8537)
DNA (1092bp) protein (364aa)
Dihydroorotate dehydrogenase (quinone) {ECO:0000256|HAMAP-Rule:MF_00225, ECO:0000256|SAAS:SAAS00084821}; EC=1.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00225, ECO:0000256|SAAS:SAAS00084821};; DHOdehase {ECO:00
Dihydroorotate dehydrogenase (quinone) n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJS1_NIAKG
Dihydroorotate dehydrogenase
scnpilot_p_inoc_scaffold_2398_12
unknown

Not on your lists

8624..8857
DNA (234bp) protein (78aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_2398_13
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8884..9426
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TF57_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02677.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (
scnpilot_p_inoc_scaffold_2398_14
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9632..10888
DNA (1257bp) protein (419aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TFD0_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV97340.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Ni
scnpilot_p_inoc_scaffold_2398_15
Porphyromonas gulae, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10949..11326)
DNA (378bp) protein (126aa)
hypothetical protein n=1 Tax=Porphyromonas gulae RepID=UPI0003742608
Uncharacterized protein {ECO:0000313|EMBL:KGN85642.1}; TaxID=111105 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas gulae.;"
scnpilot_p_inoc_scaffold_2398_16
Elizabethkingia meningoseptica, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11339..12001)
DNA (663bp) protein (221aa)
hypothetical protein n=1 Tax=Psychroflexus tropicus RepID=UPI00035E998C
Uncharacterized protein {ECO:0000313|EMBL:EQB93200.1}; TaxID=1355388 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia m
hypothetical protein
scnpilot_p_inoc_scaffold_2398_17
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12081..12770)
DNA (690bp) protein (230aa)
Tax=GWB2_Bacteroidetes_41_8_curated
Displaying 17 items

View Taxonomy