ggKbase home page

scnpilot_p_inoc_scaffold_146

Search features with annotation key words

Displaying items 1-30 of 238 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_146_1
Enhygromyxa salina, Enhygromyxa, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..234)
DNA (234bp) protein (78aa)
Maltodextrin glucosidase {ECO:0000313|EMBL:KIG16532.1}; TaxID=215803 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Enhygromyxa.;" source="Enhygromyxa salina.;"
scnpilot_p_inoc_scaffold_146_2
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(244..1809)
DNA (1566bp) protein (522aa)
Uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GEG8_9DELT rbh
Uncharacterized protein {ECO:0000313|EMBL:EYF02284.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondrom
scnpilot_p_inoc_scaffold_146_3
unknown

Not on your lists

comp(2054..3193)
DNA (1140bp) protein (380aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_146_4
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(3270..4391)
DNA (1122bp) protein (374aa)
cheB; chemotaxis Response Regulator protein CheB-glutamate methylesterase (EC:3.1.1.61) Tax=GWC2_Rokubacteria_70_16_curated
cheB; chemotaxis methylesterase CheB (EC:3.1.1.61)
Chemotaxis response regulator protein-glutamate methylesterase id=3956446 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
scnpilot_p_inoc_scaffold_146_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(4388..5881)
DNA (1494bp) protein (498aa)
cheR; chemotaxis protein methyltransferase (EC:2.1.1.80) Tax=GWA2_Rokubacteria_70_23_curated
chemotaxis protein CheR (EC:2.1.1.80)
chemotaxis protein methyltransferase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4567 rbh
scnpilot_p_inoc_scaffold_146_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(5878..6363)
DNA (486bp) protein (162aa)
purine-binding chemotaxis protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4562
cheW; chemotaxis signal transduction protein CheW; K03408 purine-binding chemotaxis protein CheW Tax=GWA2_Rokubacteria_70_23_curated
cheW; chemotaxis signal transduction protein CheW
scnpilot_p_inoc_scaffold_146_7
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6360..8378)
DNA (2019bp) protein (673aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1235458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae;
CheA signal transduction histidine kinase n=1 Tax=Stenotrophomonas maltophilia AU12-09 RepID=M5TLU9_STEMA
CheA signal transduction histidine kinase
scnpilot_p_inoc_scaffold_146_8
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8382..8747)
DNA (366bp) protein (122aa)
Chemotaxis response regulator CheY n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z2M0_AZOL4
Fis family transcriptional regulator
Fis family transcriptional regulator {ECO:0000313|EMBL:AIB12785.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azosp
scnpilot_p_inoc_scaffold_146_9
unknown

Not on your lists

comp(8794..9102)
DNA (309bp) protein (103aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_146_10
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

9387..11003
DNA (1617bp) protein (539aa)
methyl-accepting chemotaxis protein id=4764261 bin=GWC2_Methylomirabilis_70_24 species=Gemmata obscuriglobus genus=Gemmata taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good rbh
histidine kinase, HAMP region:chemotaxis sensory transducer Tax=GWA2_Rokubacteria_70_23_curated
histidine kinase, HAMP region:chemotaxis sensory transducer
scnpilot_p_inoc_scaffold_146_11
unknown

Not on your lists

11232..11801
DNA (570bp) protein (190aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_146_12
unknown

Not on your lists

11913..12500
DNA (588bp) protein (196aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_146_13
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12636..15020
DNA (2385bp) protein (795aa)
Glycosyl hydrolase, family n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GTZ7_SORC5 rbh
glycosyl hydrolase
Glycosyl hydrolase, family {ECO:0000313|EMBL:CAN97016.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium
scnpilot_p_inoc_scaffold_146_14
unknown

Not on your lists

comp(15036..15743)
DNA (708bp) protein (236aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_146_15
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16069..17049
DNA (981bp) protein (327aa)
ftsI3; pencillin-binding transpeptidase (EC:2.4.1.129)
Pencillin-binding transpeptidase with putative regulatory N-terminal domain {ECO:0000313|EMBL:CAN97656.1}; EC=2.4.1.129 {ECO:0000313|EMBL:CAN97656.1};; TaxID=448385 species="Bacteria; Proteobacteria;
Pencillin-binding transpeptidase with putative regulatory N-terminal domain n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9EZP5_SORC5
scnpilot_p_inoc_scaffold_146_16
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17172..18098
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GMU5_SORC5 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN93487.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium ce
scnpilot_p_inoc_scaffold_146_17
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18275..19207
DNA (933bp) protein (311aa)
Universal stress protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0C3N8_9BURK
Universal stress protein {ECO:0000313|EMBL:EHL20725.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;
uspA; universal stress protein
scnpilot_p_inoc_scaffold_146_18
unknown

Not on your lists

comp(19265..19714)
DNA (450bp) protein (150aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_146_19
unknown

Not on your lists

19831..20376
DNA (546bp) protein (182aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_146_20
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20377..23025)
DNA (2649bp) protein (883aa)
Uncharacterized protein n=1 Tax=Microcystis aeruginosa PCC 9807 RepID=I4H028_MICAE rbh
Six-hairpin glycosidase-like protein {ECO:0000313|EMBL:AKF08192.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" so
hypothetical protein
scnpilot_p_inoc_scaffold_146_21
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

23249..25627
DNA (2379bp) protein (793aa)
Uncharacterised conserved protein UCP016719 n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C9U6_9PLAN
hypothetical protein Tax=RBG_16_Planctomycetes_64_12_curated
hypothetical protein
scnpilot_p_inoc_scaffold_146_22
unknown

Not on your lists

25885..27111
DNA (1227bp) protein (409aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_146_23
unknown

Not on your lists

27108..27776
DNA (669bp) protein (223aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_146_24
unknown

Not on your lists

27767..28489
DNA (723bp) protein (241aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_146_25
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28557..30422
DNA (1866bp) protein (622aa)
Cytochrome C peroxidase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XUN4_SORCE
cytochrome C peroxidase
Cytochrome C peroxidase {ECO:0000313|EMBL:AGP36244.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
scnpilot_p_inoc_scaffold_146_26
unknown

Not on your lists

30843..31874
DNA (1032bp) protein (344aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_146_27

Not on your lists

31919..32524
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y8K4_SORCE
Marine sediment metagenome DNA, contig: S03H2_L09483 {ECO:0000313|EMBL:GAH33995.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
hypothetical protein
scnpilot_p_inoc_scaffold_146_28
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32545..34284)
DNA (1740bp) protein (580aa)
protein kinase (EC:2.7.11.1)
Protein kinase {ECO:0000313|EMBL:CAN94840.1}; EC=2.7.11.1 {ECO:0000313|EMBL:CAN94840.1};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae
Protein kinase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FE17_SORC5
scnpilot_p_inoc_scaffold_146_29
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34376..35194
DNA (819bp) protein (273aa)
transcriptional regulator n=1 Tax=Myxococcus xanthus RepID=UPI000378FC18
DNA-binding regulatory protein
Transcriptional regulator {ECO:0000313|EMBL:KFA90011.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="
scnpilot_p_inoc_scaffold_146_30

Not on your lists

comp(35253..35672)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Cellulophaga lytica (strain ATCC 23178 / DSM 7489 / JCM 8516 / NBRC 14961 / NCIMB 1423 / VKM B-1433 / Cy l20) RepID=F0RAY0_CELLC
Uncharacterized protein {ECO:0000313|EMBL:KKO01212.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
Displaying items 1-30 of 238 in total

View Taxonomy