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scnpilot_p_inoc_scaffold_400

Search features with annotation key words

Displaying items 1-30 of 70 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_400_1
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(1..789)
DNA (789bp) protein (263aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H6C0_ANADF id=5223528 bin=16ft_combo_ws3_JS1 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
NAD-dependent epimerase/dehydratase Tax=RBG_16_RIF_WS3X_71_46_curated
hypothetical protein
scnpilot_p_inoc_scaffold_400_2
Myxococcus sp. (contaminant ex DSM 436), Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1054..1383)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2TTU4_9DELT
Uncharacterized protein {ECO:0000313|EMBL:ERK85788.1}; TaxID=1297742 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxoco
hypothetical protein
scnpilot_p_inoc_scaffold_400_3
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1527..2459
DNA (933bp) protein (311aa)
LysR family transcriptional regulator n=1 Tax=Cupriavidus sp. UYPR2.512 RepID=UPI0003606F5A
Transcriptional regulator, LysR family
Cupriavidus basilensis strain 4G11 chromosome secondary, complete sequence {ECO:0000313|EMBL:AJG22781.1}; TaxID=68895 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholder
scnpilot_p_inoc_scaffold_400_4
unknown

Not on your lists

2469..2813
DNA (345bp) protein (115aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_400_5
unknown

Not on your lists

2824..3225
DNA (402bp) protein (134aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_400_6
unknown

Not on your lists

comp(3312..3533)
DNA (222bp) protein (74aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_400_7
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3688..3951)
DNA (264bp) protein (88aa)
hypothetical protein
Putative uncharacterized protein id=4691368 bin=GWA2__Bacteriovorax-rel_49_15 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2__Bacteriovorax-rel_49_15 organism_group=Deltaproteobacteria
Uncharacterized protein {ECO:0000313|EMBL:ABA05920.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winograds
scnpilot_p_inoc_scaffold_400_8
Scytonema millei, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(4368..5771)
DNA (1404bp) protein (468aa)
FAD linked oxidase domain protein n=1 Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9U2T9_9CYAN rbh
FAD linked oxidase domain-containing protein
Oxidoreductase {ECO:0000313|EMBL:KIF21880.1}; TaxID=1245923 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema millei VB511283.;"
scnpilot_p_inoc_scaffold_400_9
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5961..7496)
DNA (1536bp) protein (512aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cy
Uncharacterized protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QFS9_9DELT rbh
sensor protein
scnpilot_p_inoc_scaffold_400_10
Herminiimonas arsenicoxydans, Herminiimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7670..8629)
DNA (960bp) protein (320aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003815A40
Uncharacterized protein {ECO:0000313|EMBL:CAL62813.2}; TaxID=204773 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herminiimonas.;" source="Herminiimonas ars
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein
scnpilot_p_inoc_scaffold_400_11
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8687..10066)
DNA (1380bp) protein (460aa)
GTPase HflX n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XIM3_SORCE rbh
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiin
GTP-binding protein HflX
scnpilot_p_inoc_scaffold_400_12
BJP_IG2069_Desfulfarculales_53_13, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10193..11905)
DNA (1713bp) protein (571aa)
TrkA-N domain protein n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LGP3_SYNFM rbh
TrkA domain-containing protein
Tax=BJP_IG2069_Desfulfarculales_53_13
scnpilot_p_inoc_scaffold_400_13
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12220..13191
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FT40_SORC5
Thioredoxin {ECO:0000313|EMBL:EYF04060.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apicula
hypothetical protein
scnpilot_p_inoc_scaffold_400_14
Streptococcus canis, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13201..14100)
DNA (900bp) protein (300aa)
Polysaccharide deacetylase family protein n=1 Tax=Streptococcus canis FSL Z3-227 RepID=I7WFR3_STRCB
polysaccharide deacetylase
Polysaccharide deacetylase family protein {ECO:0000313|EMBL:EIQ82222.1}; TaxID=482234 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus
scnpilot_p_inoc_scaffold_400_15
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14389..15945
DNA (1557bp) protein (519aa)
Adenylyl cyclase class-3/4/guanylyl cyclase n=1 Tax=Beggiatoa sp. PS RepID=A7BZE8_9GAMM rbh
Adenylate cyclase {ECO:0000313|EMBL:EYF03742.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces a
adenylate/guanylate cyclase
scnpilot_p_inoc_scaffold_400_16
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16097..17572
DNA (1476bp) protein (492aa)
FAD linked oxidase id=7718436 bin=BACIGN_2 species=Conexibacter woesei genus=Conexibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=BACIGN_2 organism_group=Unknown_CP
Putative oxidoreductase {ECO:0000313|EMBL:CDP53048.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
FAD linked oxidase
scnpilot_p_inoc_scaffold_400_17
unknown

Not on your lists

17733..19328
DNA (1596bp) protein (532aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_400_18
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19374..20711
DNA (1338bp) protein (446aa)
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J3CHK4_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL71536.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.
hypothetical protein
scnpilot_p_inoc_scaffold_400_19
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20772..21956)
DNA (1185bp) protein (395aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XRT4_SORCE rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP34585.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
scnpilot_p_inoc_scaffold_400_20
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21983..23212)
DNA (1230bp) protein (410aa)
Uncharacterized protein {ECO:0000313|EMBL:AKF07715.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandara
scnpilot_p_inoc_scaffold_400_21
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23223..24398)
DNA (1176bp) protein (392aa)
Putative integral membrane protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FHT7_SORC5
Uncharacterized protein {ECO:0000313|EMBL:EYF04899.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondrom
integral membrane protein
scnpilot_p_inoc_scaffold_400_22
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24462..25340)
DNA (879bp) protein (293aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltra
Release factor glutamine methyltransferase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YEN6_SORCE rbh
hypothetical protein rbh
scnpilot_p_inoc_scaffold_400_23
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25330..26814)
DNA (1485bp) protein (495aa)
Phosphomannomutase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XIF3_SORCE rbh
Phosphomannomutase {ECO:0000313|EMBL:EYF00912.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces
phosphomannomutase
scnpilot_p_inoc_scaffold_400_24
unknown

Not on your lists

26832..27437
DNA (606bp) protein (202aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_400_25
unknown

Not on your lists

27644..29245
DNA (1602bp) protein (534aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_400_26
RBG_16_Deltaproteobacteria_71_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29324..33361)
DNA (4038bp) protein (1346aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y8L3_SORCE
hypothetical protein Tax=RBG_16_Deltaproteobacteria_71_12_curated
hypothetical protein
scnpilot_p_inoc_scaffold_400_27
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33746..34261)
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XR57_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP34881.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
scnpilot_p_inoc_scaffold_400_28
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34258..35331)
DNA (1074bp) protein (358aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G987_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN99141.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium ce
scnpilot_p_inoc_scaffold_400_29
unknown

Not on your lists

35540..35821
DNA (282bp) protein (94aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_400_30
unknown

Not on your lists

35818..36354
DNA (537bp) protein (179aa)

This feature has no annotations

Displaying items 1-30 of 70 in total

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