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scnpilot_p_inoc_scaffold_441

Search features with annotation key words

Displaying items 1-30 of 67 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_441_1
unknown

Not on your lists

comp(3..638)
DNA (636bp) protein (212aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_441_2
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(635..1006)
DNA (372bp) protein (124aa)
UPI0003CFBAF3 related cluster n=1 Tax=unknown RepID=UPI0003CFBAF3
Uncharacterized protein {ECO:0000313|EMBL:ESZ10792.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
scnpilot_p_inoc_scaffold_441_3
unknown

Not on your lists

comp(1017..1700)
DNA (684bp) protein (228aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_441_4
unknown

Not on your lists

comp(1718..1918)
DNA (201bp) protein (67aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_441_5
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

2292..2855
DNA (564bp) protein (188aa)
ATP--cobalamin adenosyltransferase n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NQI0_ROSCS
ATP--cobalamin adenosyltransferase
ATP--cobalamin adenosyltransferase {ECO:0000313|EMBL:ABU59826.1}; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Rose
scnpilot_p_inoc_scaffold_441_6
unknown

Not on your lists

comp(3044..3727)
DNA (684bp) protein (228aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_441_7
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4189..4752)
DNA (564bp) protein (188aa)
ECF-family RNA polymerase sigma factor n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GQQ1_SORC5
ECF family RNA polymerase sigma factor
ECF-family RNA polymerase sigma factor {ECO:0000313|EMBL:CAN90479.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" sourc
scnpilot_p_inoc_scaffold_441_8
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5097..6659)
DNA (1563bp) protein (521aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XNZ1_SORCE rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP33485.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
scnpilot_p_inoc_scaffold_441_9
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6664..7074)
DNA (411bp) protein (137aa)
Holo-[acyl-carrier-protein] synthase {ECO:0000256|SAAS:SAAS00237208}; EC=2.7.8.- {ECO:0000256|SAAS:SAAS00276260};; EC=2.7.8.7 {ECO:0000256|SAAS:SAAS00237180};; 4'-phosphopantetheinyl transferase {ECO:
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XLT0_SORCE
hypothetical protein
scnpilot_p_inoc_scaffold_441_10
Methylobacterium sp. GXF4, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7071..7838)
DNA (768bp) protein (256aa)
Pyridoxine 5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00279, ECO:0000256|SAAS:SAAS00088558}; Short=PNP synthase {ECO:0000256|HAMAP-Rule:MF_00279};; EC=2.6.99.2 {ECO:0000256|HAMAP-Rule:MF_00279,
Pyridoxine 5'-phosphate synthase n=1 Tax=Methylobacterium sp. GXF4 RepID=I9WXW0_9RHIZ
pyridoxine 5'-phosphate synthase
scnpilot_p_inoc_scaffold_441_11
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7992..11159)
DNA (3168bp) protein (1056aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y2U5_SORCE rbh
Uncharacterized protein {ECO:0000313|EMBL:EYF08842.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondrom
hypothetical protein
scnpilot_p_inoc_scaffold_441_12
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11288..12028)
DNA (741bp) protein (247aa)
ubiG3; 3-demethylubiquinone-9 3-methyltransferase (EC:2.1.1.64)
3-demethylubiquinone-9 3-O-methyltransferase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F8X4_SORC5 rbh
Methyltransferase type 11 {ECO:0000313|EMBL:EYF04640.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondr
scnpilot_p_inoc_scaffold_441_13
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12088..13365)
DNA (1278bp) protein (426aa)
Serine/threonine protein kinase n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LZM2_HALO1
Serine/threonine protein kinase {ECO:0000313|EMBL:AKF04734.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source=
serine/threonine protein kinase
scnpilot_p_inoc_scaffold_441_14
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13488..14768)
DNA (1281bp) protein (427aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F5W3_SORC5
Uncharacterized protein {ECO:0000313|EMBL:EYF06371.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondrom
hypothetical protein
scnpilot_p_inoc_scaffold_441_15
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14846..16432)
DNA (1587bp) protein (529aa)
hypothetical protein n=1 Tax=Smaragdicoccus niigatensis RepID=UPI00036C99F0 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP37911.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
scnpilot_p_inoc_scaffold_441_16
Symbiobacterium thermophilum, Symbiobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16597..17136)
DNA (540bp) protein (180aa)
Putative uncharacterized protein n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67K65_SYMTH
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAD41933.1}; TaxID=292459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Symbiobacteriaceae; Symbiobacterium.;" source="Symbiobacterium th
scnpilot_p_inoc_scaffold_441_17
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17299..18303
DNA (1005bp) protein (335aa)
LysR family transcriptional regulator n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XJB0_SORCE rbh
Putative transcriptional regulator protein, LysR family {ECO:0000313|EMBL:EYF03081.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae;
LysR family transcriptional regulator
scnpilot_p_inoc_scaffold_441_18
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18364..19239)
DNA (876bp) protein (292aa)
4-hydroxybenzoate polyprenyltransferase; K03179 4-hydroxybenzoate octaprenyltransferase [EC:2.5.1.-] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
4-hydroxybenzoate polyprenyltransferase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4E81
4-hydroxybenzoate polyprenyltransferase
scnpilot_p_inoc_scaffold_441_19
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19239..20570)
DNA (1332bp) protein (444aa)
Amidohydrolase 1 n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IMW5_ANADE
amidohydrolase 1
Amidohydrolase 1 {ECO:0000313|EMBL:ABC80146.1}; Flags: Precursor;; TaxID=290397 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyx
scnpilot_p_inoc_scaffold_441_20
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20567..22465)
DNA (1899bp) protein (633aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IMW4_ANADE rbh
Cyclic dehypoxanthine futalosine synthase {ECO:0000313|EMBL:GAO02547.1}; TaxID=1300915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; An
hypothetical protein
scnpilot_p_inoc_scaffold_441_21
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(22462..23604)
DNA (1143bp) protein (381aa)
radical SAM protein id=12557426 bin=CNBR_ACIDO species=Plesiocystis pacifica genus=Plesiocystis taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? rbh
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
radical SAM domain-containing protein
scnpilot_p_inoc_scaffold_441_22
unknown

Not on your lists

comp(23597..24172)
DNA (576bp) protein (192aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_441_23
Methylacidiphilum infernorum, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

Not on your lists

comp(24169..24771)
DNA (603bp) protein (201aa)
Aromatic acid decarboxylase {ECO:0000256|RuleBase:RU362054}; EC=4.1.1.- {ECO:0000256|RuleBase:RU362054};; TaxID=481448 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphil
3-polyprenyl-4-hydroxybenzoate decarboxylase n=1 Tax=Methylacidiphilum infernorum (isolate V4) RepID=B3DY20_METI4
ubiX; 3-polyprenyl-4-hydroxybenzoate decarboxylase
scnpilot_p_inoc_scaffold_441_24
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24768..26999)
DNA (2232bp) protein (744aa)
ubiD; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase (EC:4.1.1.-); K03182 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiD [EC:4.1.1.-] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
3-octaprenyl-4-hydroxybenzoate carboxy-lyase n=1 Tax=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) RepID=C4XSA9_DESMR rbh
ubiD; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase
scnpilot_p_inoc_scaffold_441_25
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27148..27672
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F8X3_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN94699.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium ce
scnpilot_p_inoc_scaffold_441_26
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27797..29023
DNA (1227bp) protein (409aa)
serA2; D-3-phosphoglycerate dehydrogenase (EC:1.1.1.95) rbh
D-3-phosphoglycerate dehydrogenase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G899_SORC5 rbh
D-3-phosphoglycerate dehydrogenase {ECO:0000313|EMBL:EYF02252.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" sourc
scnpilot_p_inoc_scaffold_441_27
unknown

Not on your lists

29025..29636
DNA (612bp) protein (204aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_441_28
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29795..29983)
DNA (189bp) protein (63aa)
SRp25 nuclear protein, isoform 3, putative n=2 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08YL3_STIAD
SRp25 nuclear protein, isoform 3, putative {ECO:0000313|EMBL:EAU65551.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmat
hypothetical protein
scnpilot_p_inoc_scaffold_441_29
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30052..31461)
DNA (1410bp) protein (470aa)
DeaD2 protein {ECO:0000313|EMBL:CAN93692.1}; EC=3.-.-.- {ECO:0000313|EMBL:CAN93692.1};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae;
DeaD2 protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GRX1_SORC5 rbh
deaD2; hypothetical protein
scnpilot_p_inoc_scaffold_441_30
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32154..32603)
DNA (450bp) protein (150aa)
Ribosome-binding factor A n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=RBFA_SORC5
rbfA; hypothetical protein
Ribosome-binding factor A {ECO:0000255|HAMAP-Rule:MF_00003}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorang
Displaying items 1-30 of 67 in total

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