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scnpilot_p_inoc_scaffold_484

Search features with annotation key words

Displaying items 1-30 of 66 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_484_1
unknown

Not on your lists

comp(1..333)
DNA (333bp) protein (111aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_484_2
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(513..2396)
DNA (1884bp) protein (628aa)
aspS; aspartyl-tRNA synthase (EC:6.1.1.12)
Aspartate--tRNA ligase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XML6_SORCE rbh
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:EYF06533.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondro
scnpilot_p_inoc_scaffold_484_3
unknown

Not on your lists

2485..3027
DNA (543bp) protein (181aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_484_4
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3024..4325
DNA (1302bp) protein (434aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FNN3_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN98440.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium ce
scnpilot_p_inoc_scaffold_484_5
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4383..5480
DNA (1098bp) protein (366aa)
Uncharacterized protein n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UIW7_ANASK
Uncharacterized protein {ECO:0000313|EMBL:KFA93002.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cy
hypothetical protein
scnpilot_p_inoc_scaffold_484_6
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5588..6964
DNA (1377bp) protein (459aa)
GlnA1 protein {ECO:0000313|EMBL:CAN94113.1}; EC=6.3.1.2 {ECO:0000313|EMBL:CAN94113.1};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae;
GlnA1 protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9EQA0_SORC5 rbh
glnA1; hypothetical protein
scnpilot_p_inoc_scaffold_484_7
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7197..8330
DNA (1134bp) protein (378aa)
gbd; alcohol dehydrogenase (EC:1.1.1.-)
Alcohol dehydrogenase {ECO:0000313|EMBL:CAN94112.1}; EC=1.1.1.- {ECO:0000313|EMBL:CAN94112.1};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyang
Alcohol dehydrogenase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9EQ97_SORC5 rbh
scnpilot_p_inoc_scaffold_484_8
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8417..10255
DNA (1839bp) protein (613aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PFN4_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS41447.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
scnpilot_p_inoc_scaffold_484_9
unknown

Not on your lists

comp(10364..12055)
DNA (1692bp) protein (564aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_484_10
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12142..13578
DNA (1437bp) protein (479aa)
Acetoacetate metabolism regulatory protein AtoC n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XNR7_SORCE rbh
acetoacetate metabolism regulatory protein AtoC
Acetoacetate metabolism regulatory protein AtoC {ECO:0000313|EMBL:AGP32298.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangiu
scnpilot_p_inoc_scaffold_484_11
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13955..14965
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XT98_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP35769.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
scnpilot_p_inoc_scaffold_484_12
Marinomonas mediterranea, Marinomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15057..16961)
DNA (1905bp) protein (635aa)
aqualysin 1 (EC:3.4.21.111)
Aqualysin 1 {ECO:0000313|EMBL:ADZ89414.1}; EC=3.4.21.111 {ECO:0000313|EMBL:ADZ89414.1};; TaxID=717774 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Marinomonas.;" source="
Aqualysin 1 n=1 Tax=Marinomonas mediterranea (strain ATCC 700492 / JCM 21426 / NBRC 103028 / MMB-1) RepID=F2JVF6_MARM1
scnpilot_p_inoc_scaffold_484_13
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17828..19360
DNA (1533bp) protein (511aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XV04_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP36181.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
scnpilot_p_inoc_scaffold_484_14
unknown

Not on your lists

19845..20570
DNA (726bp) protein (242aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_484_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

21261..23105
DNA (1845bp) protein (615aa)
FG-GAP repeat protein n=1 Tax=Gloeocapsa sp. PCC 73106 RepID=L8LG40_9CHRO
laminin G domain-containing protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
laminin G domain-containing protein
scnpilot_p_inoc_scaffold_484_16
unknown

Not on your lists

comp(23402..23518)
DNA (117bp) protein (39aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_484_17
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23530..24645
DNA (1116bp) protein (372aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=269799 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geo
dTDP-glucose 4,6-dehydratase n=2 Tax=Geobacter metallireducens RepID=Q39SS6_GEOMG
rmlB; dTDP-glucose 4,6-dehydratase
scnpilot_p_inoc_scaffold_484_18
Enterobacter sp. 638, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24642..25523
DNA (882bp) protein (294aa)
glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=399742 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobact
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Enterobacter sp. (strain 638) RepID=A4WC89_ENT38
scnpilot_p_inoc_scaffold_484_19
Anaerolinea thermophila, Anaerolinea, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

25533..26657
DNA (1125bp) protein (375aa)
putative aminotransferase (EC:2.6.1.-)
Putative aminotransferase {ECO:0000313|EMBL:BAJ64042.1}; EC=2.6.1.- {ECO:0000313|EMBL:BAJ64042.1};; TaxID=926569 species="Bacteria; Chloroflexi; Anaerolineae; Anaerolineales; Anaerolineaceae; Anaeroli
Putative aminotransferase n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8MXG1_ANATU rbh
scnpilot_p_inoc_scaffold_484_20
RBG_13_Planctomycetes_60_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

26644..27468
DNA (825bp) protein (275aa)
Generic methyltransferase id=2266884 bin=GWA2_OP3_52_12 species=Nitrosospira multiformis genus=Nitrosospira taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
type 11 methyltransferase Tax=RBG_13_Planctomycetes_60_9_curated
methyltransferase family protein
scnpilot_p_inoc_scaffold_484_21
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27597..28211
DNA (615bp) protein (205aa)
Putative uncharacterized protein n=1 Tax=Beggiatoa sp. PS RepID=A7C2K5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EDN66981.1}; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
methyltransferase
scnpilot_p_inoc_scaffold_484_22
GWD1_Spirochaetes_27_9_curated, Spirochaetes, Bacteria

Not on your lists

comp(28250..28765)
DNA (516bp) protein (172aa)
Uncharacterized protein id=3551558 bin=GWC1_Spirochaetes_27_15 species=Vibrio parahaemolyticus genus=Vibrio taxon_order=Vibrionales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC1_Spirochaetes_27_15 organism_group=Spirochaetes
hypothetical protein Tax=GWD1_Spirochaetes_27_9_curated
pseudaminic acid biosynthesis N-acetyl transferase
scnpilot_p_inoc_scaffold_484_23
Cohnella sp. VKM B-2846, Cohnella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(28770..30113)
DNA (1344bp) protein (448aa)
o-succinylbenzoate--CoA ligase (EC:6.2.1.26)
AMP-dependent synthetase and ligase n=1 Tax=Pelosinus fermentans JBW45 RepID=I9NNS0_9FIRM rbh
AMP-dependent synthetase {ECO:0000313|EMBL:KIL35414.1}; TaxID=1590652 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Cohnella.;" source="Cohnella sp. VKM B-2846.;"
scnpilot_p_inoc_scaffold_484_24
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(30114..30821)
DNA (708bp) protein (236aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5USD0_ROSS1
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABQ89533.1}; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source=
scnpilot_p_inoc_scaffold_484_25
Saccharothrix sp. ST-888, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30814..31182)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Vibrio sp. HENC-02 RepID=K5WAW2_9VIBR
Uncharacterized protein {ECO:0000313|EMBL:KJK57076.1}; TaxID=1427391 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix sp. ST-888.;"
hypothetical protein
scnpilot_p_inoc_scaffold_484_26
RBG_13_Chloroflexi_48_10_curated, Chloroflexi, Bacteria

Not on your lists

comp(31271..32215)
DNA (945bp) protein (315aa)
putative glycosyltransferase (EC:2.4.-.-); K10012 undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [EC:2.7.8.30] Tax=RBG_13_Chloroflexi_48_10_curated
Putative glycosyltransferase id=4302224 bin=GWF2_Lentisphaerae_57_35 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459 rbh
family 2 glycosyl transferase
scnpilot_p_inoc_scaffold_484_27
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32344..34356)
DNA (2013bp) protein (671aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:413 RepID=R6NN27_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC12635.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
scnpilot_p_inoc_scaffold_484_28
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34726..36063
DNA (1338bp) protein (446aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y755_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP38713.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
scnpilot_p_inoc_scaffold_484_29
CSP1_8_Deltaproteobacteria, 43F-1404R, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36080..37054)
DNA (975bp) protein (325aa)
rfaEa; d-beta-d-heptose 7-phosphate kinase (EC:2.7.1.-) id=14624544 bin=bin5_DeltaP species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=bin5_DeltaP organism_group=Deltaproteobacteria
rfaEa; d-beta-d-heptose 7-phosphate kinase (EC:2.7.1.-) Tax=CSP1_8_Deltaproteobacteria
PfkB domain-containing protein
scnpilot_p_inoc_scaffold_484_30
Thioalkalivibrio nitratireducens, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37057..37566)
DNA (510bp) protein (170aa)
D,D-heptose 1,7-bisphosphate phosphatase {ECO:0000256|PIRNR:PIRNR004682}; EC=3.1.3.- {ECO:0000256|PIRNR:PIRNR004682};; TaxID=1255043 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiale
D,D-heptose 1,7-bisphosphate phosphatase n=1 Tax=Thioalkalivibrio nitratireducens (strain DSM 14787 / UNIQEM 213 / ALEN2) RepID=L0DZE8_THIND
gmhB_[H]; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase
Displaying items 1-30 of 66 in total

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