ggKbase home page

scnpilot_p_inoc_scaffold_580

Search features with annotation key words

Displaying items 1-30 of 58 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_580_1
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..185
DNA (183bp) protein (61aa)
Potassium efflux system protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HW48_9RHIZ
Potassium efflux system protein {ECO:0000313|EMBL:EHK55052.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizo
kefB; glutathione-regulated potassium efflux protein B
scnpilot_p_inoc_scaffold_580_2
unknown

Not on your lists

357..1307
DNA (951bp) protein (317aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_580_3
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1350..1946
DNA (597bp) protein (199aa)
ECF-family RNA polymerase sigma factor n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FYE7_SORC5
ECF family RNA polymerase sigma factor
ECF-family RNA polymerase sigma factor {ECO:0000313|EMBL:CAN95611.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" sourc
scnpilot_p_inoc_scaffold_580_4
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1943..2773
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G8V3_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN99074.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium ce
scnpilot_p_inoc_scaffold_580_5
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2795..4165
DNA (1371bp) protein (457aa)
Tryptophan synthase alpha chain {ECO:0000313|EMBL:AKF02998.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source=
scnpilot_p_inoc_scaffold_580_6
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4186..6033
DNA (1848bp) protein (616aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G2B6_SORC5
Uncharacterized protein {ECO:0000313|EMBL:EYF08151.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondrom
hypothetical protein
scnpilot_p_inoc_scaffold_580_7
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6017..7807
DNA (1791bp) protein (597aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G2B6_SORC5
Uncharacterized protein {ECO:0000313|EMBL:EYF08149.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondrom
hypothetical protein
scnpilot_p_inoc_scaffold_580_8
Achromobacter piechaudii, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8089..8538)
DNA (450bp) protein (150aa)
GNAT family acetyltransferase n=1 Tax=Achromobacter piechaudii HLE RepID=J4YQS8_9BURK
GNAT family acetyltransferase {ECO:0000313|EMBL:EJO31021.1}; TaxID=1156919 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacte
acetyltransferase (GNAT) family protein
scnpilot_p_inoc_scaffold_580_9
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8845..10536)
DNA (1692bp) protein (564aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YAJ6_SORCE rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP41330.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
scnpilot_p_inoc_scaffold_580_10
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10766..11386)
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y0G0_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP37971.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
scnpilot_p_inoc_scaffold_580_11
RBG_16_Zixibacteria_40_9_curated, Zixibacteria, Bacteria

Not on your lists

comp(11542..12738)
DNA (1197bp) protein (399aa)
multi-sensor hybrid histidine kinase Tax=RBG_16_Zixibacteria_40_9_curated
multi-sensor signal transduction histidine kinase id=14626073 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
two-component hybrid sensor and regulator
scnpilot_p_inoc_scaffold_580_12
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12750..13775
DNA (1026bp) protein (342aa)
Anti-anti sigma factor protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9EVT1_SORC5 rbh
anti-anti sigma factor protein
Anti-anti sigma factor protein {ECO:0000313|EMBL:CAN94254.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Soran
scnpilot_p_inoc_scaffold_580_13
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13775..14149
DNA (375bp) protein (125aa)
Anti-sigma-factor antagonist n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0QCE6_ACIAP
anti-sigma-factor antagonist
Anti-sigma-factor antagonist {ECO:0000313|EMBL:ABM33538.1}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrul
scnpilot_p_inoc_scaffold_580_14
Burkholderia phytofirmans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14149..14562
DNA (414bp) protein (138aa)
Putative anti-sigma regulatory factor, serine/threonine protein kinase n=1 Tax=Burkholderia phytofirmans (strain DSM 17436 / PsJN) RepID=B2TGE4_BURPP
anti-sigma regulatory factor
Putative anti-sigma regulatory factor, serine/threonine protein kinase {ECO:0000313|EMBL:ACD20116.1}; TaxID=398527 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiac
scnpilot_p_inoc_scaffold_580_15
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14574..15566
DNA (993bp) protein (331aa)
Anti-sigma B factor RsbT / Phosphoserine phosphatase RsbX n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9P0E3_9DELT
Anti-sigma B factor RsbT / Phosphoserine phosphatase RsbX {ECO:0000313|EMBL:EPX57920.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobact
stage II sporulation protein E
scnpilot_p_inoc_scaffold_580_16
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15759..16187
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UB70_ANASK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACG71718.1}; TaxID=447217 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" s
scnpilot_p_inoc_scaffold_580_17
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16191..17411
DNA (1221bp) protein (407aa)
NnrS family protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C361_NITHN rbh
NnrS family protein
NnrS family protein {ECO:0000313|EMBL:ADE14953.1}; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (
scnpilot_p_inoc_scaffold_580_18
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17433..17855)
DNA (423bp) protein (141aa)
Putative universal stress protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FM76_SORC5
Uncharacterized protein {ECO:0000313|EMBL:EYF03612.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondrom
hypothetical protein
scnpilot_p_inoc_scaffold_580_19
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18028..18468)
DNA (441bp) protein (147aa)
CBS domain containing protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GML2_SORC5
hypothetical protein
CBS domain containing protein {ECO:0000313|EMBL:CAN93453.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorang
scnpilot_p_inoc_scaffold_580_20
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18604..19095
DNA (492bp) protein (164aa)
Universal stress protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9EYM8_SORC5
Universal stress protein family {ECO:0000313|EMBL:AKF08508.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source=
universal stress protein
scnpilot_p_inoc_scaffold_580_21
RBG_16_Bdellovibrionales_40_8_curated, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

19144..19602
DNA (459bp) protein (153aa)
Tax=RBG_16_Bdellovibrionales_40_8_curated
scnpilot_p_inoc_scaffold_580_22
unknown

Not on your lists

comp(19676..19939)
DNA (264bp) protein (88aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_580_23
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19936..20547)
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LMR1_HALO1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY18748.1}; Flags: Precursor;; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;"
scnpilot_p_inoc_scaffold_580_24
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20600..21823
DNA (1224bp) protein (408aa)
Uncharacterized protein n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LMR3_HALO1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY18750.1}; Flags: Precursor;; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;"
scnpilot_p_inoc_scaffold_580_25
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21820..22872
DNA (1053bp) protein (351aa)
Uncharacterized protein n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LMR4_HALO1 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY18751.1}; Flags: Precursor;; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;"
scnpilot_p_inoc_scaffold_580_26
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22869..24830
DNA (1962bp) protein (654aa)
Uncharacterized protein n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LMR5_HALO1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY18752.1}; Flags: Precursor;; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;"
scnpilot_p_inoc_scaffold_580_27
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24917..26416)
DNA (1500bp) protein (500aa)
Cytochrome C family protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HBD3_ANADF
cytochrome C family protein
Cytochrome C family protein {ECO:0000313|EMBL:ABS26029.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.
scnpilot_p_inoc_scaffold_580_28
BJP_IG2158_Zixibacteria_48_33, Zixibacteria, Bacteria

Not on your lists

26490..27785
DNA (1296bp) protein (432aa)
hypothetical protein id=24576670 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
triple helix repeat-containing collagen
Tax=BJP_IG2158_Zixibacteria_48_33
scnpilot_p_inoc_scaffold_580_29
unknown

Not on your lists

27953..28231
DNA (279bp) protein (93aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_580_30
unknown

Not on your lists

28262..28453
DNA (192bp) protein (64aa)

This feature has no annotations

Displaying items 1-30 of 58 in total

View Taxonomy