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scnpilot_p_inoc_scaffold_589

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_589_1
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3..2060)
DNA (2058bp) protein (686aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|H
Valine--tRNA ligase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QKY7_9DELT
valS; valyl-tRNA synthetase
scnpilot_p_inoc_scaffold_589_2
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2293..3135)
DNA (843bp) protein (281aa)
Response regulator n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GHW8_SORC5
response regulator
Response regulator {ECO:0000313|EMBL:CAN90168.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulo
scnpilot_p_inoc_scaffold_589_3
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3324..4400
DNA (1077bp) protein (359aa)
Pseudouridine synthase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XIR3_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP33027.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
scnpilot_p_inoc_scaffold_589_4
unknown

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comp(4461..7202)
DNA (2742bp) protein (914aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_589_5
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7381..11346)
DNA (3966bp) protein (1322aa)
PA domain protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08UE2_STIAD
Chitinase {ECO:0000313|EMBL:KFE62096.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum
peptidase m36, fungalysin
scnpilot_p_inoc_scaffold_589_6
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11646..13394)
DNA (1749bp) protein (583aa)
amino acid/peptide transporter (EC:3.1.3.1)
Amino acid/peptide transporter n=1 Tax=Imtechella halotolerans K1 RepID=I0WI93_9FLAO
amino acid/peptide transporter; K03305 proton-dependent oligopeptide transporter, POT family Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_p_inoc_scaffold_589_7
unknown

Not on your lists

comp(13605..13787)
DNA (183bp) protein (61aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_589_8
unknown

Not on your lists

comp(13784..14047)
DNA (264bp) protein (88aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_589_9
CG_Delta_07, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14116..15591
DNA (1476bp) protein (492aa)
glycosyl hydrolases family 16 Tax=CG_Delta_07
scnpilot_p_inoc_scaffold_589_10
unknown

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comp(15620..15802)
DNA (183bp) protein (61aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_589_11
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15945..16970)
DNA (1026bp) protein (342aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XMR2_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP33025.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
scnpilot_p_inoc_scaffold_589_12
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17000..18058
DNA (1059bp) protein (353aa)
Heat-inducible transcription repressor HrcA n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=HRCA_SORC5 rbh
hrcA; heat-inducible transcriptional repressor
Heat-inducible transcription repressor HrcA {ECO:0000255|HAMAP-Rule:MF_00081}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium
scnpilot_p_inoc_scaffold_589_13
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18122..19483
DNA (1362bp) protein (454aa)
Putative cAMP-binding protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GL27_SORC5 rbh
cAMP-binding protein
Putative cAMP-binding protein {ECO:0000313|EMBL:CAN90217.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorang
scnpilot_p_inoc_scaffold_589_14
Dictyostelium purpureum, Dictyostelium, Dictyosteliida, Eukaryota

Not on your lists

19483..20499
DNA (1017bp) protein (339aa)
Putative uncharacterized protein n=1 Tax=Dictyostelium purpureum RepID=F0ZE74_DICPU
Putative uncharacterized protein {ECO:0000313|EMBL:EGC37752.1}; TaxID=5786 species="Eukaryota; Amoebozoa; Mycetozoa; Dictyosteliida; Dictyostelium.;" source="Dictyostelium purpureum (Slime mold).;"
czcD; cation diffusion facilitator family transporter
scnpilot_p_inoc_scaffold_589_15
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20547..21560)
DNA (1014bp) protein (338aa)
18K peptidoglycan-associated outer membrane lipoprotein n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2RVR8_9DELT
Tryptophan synthase alpha chain {ECO:0000313|EMBL:AKF04741.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source=
OmpA family protein
scnpilot_p_inoc_scaffold_589_16
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21948..22553
DNA (606bp) protein (202aa)
Outer membrane protein, putative n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GEJ2_SORC5
Outer membrane protein H {ECO:0000313|EMBL:EYF04333.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondro
outer membrane protein
scnpilot_p_inoc_scaffold_589_17
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22550..23581
DNA (1032bp) protein (344aa)
lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; K02536 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curate
UDP-3-O-acylglucosamine N-acyltransferase n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=LPXD_ANAD2
UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
scnpilot_p_inoc_scaffold_589_18
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23578..24033
DNA (456bp) protein (152aa)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064869}; EC=4.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064862};; (
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XKN2_SORCE
3-hydroxyacyl-ACP dehydratase
scnpilot_p_inoc_scaffold_589_19
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24118..24933
DNA (816bp) protein (272aa)
acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase (EC:2.3.1.129); K00677 UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] Tax=GWD2_Deltaproteobacteria_55_8_curated
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase id=1897080 bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase
scnpilot_p_inoc_scaffold_589_20
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25184..26002)
DNA (819bp) protein (273aa)
Aldo/keto reductase family oxidoreductase n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CHZ6_MYXFH
aldo/keto reductase family oxidoreductase
Aldo/keto reductase family oxidoreductase {ECO:0000313|EMBL:AEI62553.1}; TaxID=483219 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.
scnpilot_p_inoc_scaffold_589_21
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26169..27098)
DNA (930bp) protein (310aa)
Putative exported peptidase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GP48_SORC5
Uncharacterized protein {ECO:0000313|EMBL:AKF05979.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandara
exported peptidase
scnpilot_p_inoc_scaffold_589_22
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27095..27661)
DNA (567bp) protein (189aa)
Putative secreted protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GP45_SORC5
hypothetical protein
Putative secreted protein {ECO:0000313|EMBL:CAN96703.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium
scnpilot_p_inoc_scaffold_589_23
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(27868..29313)
DNA (1446bp) protein (482aa)
Urea amidolyase related protein n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1IYL5_9BACT
urea amidolyase
Urea amidolyase {ECO:0000313|EMBL:AHF89658.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
scnpilot_p_inoc_scaffold_589_24
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29310..29981)
DNA (672bp) protein (224aa)
Lactam utilization protein LamB n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QR75_9DELT
Lactam utilization protein LamB {ECO:0000313|EMBL:EPX63814.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" so
LamB/YcsF family/allophanate hydrolase family protein
scnpilot_p_inoc_scaffold_589_25
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30097..30924
DNA (828bp) protein (276aa)
Conserved secreted protein, lemA family n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GR21_SORC5
hypothetical protein
Conserved secreted protein, lemA family {ECO:0000313|EMBL:CAN90528.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" sour
scnpilot_p_inoc_scaffold_589_26
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31194..32873
DNA (1680bp) protein (560aa)
FAD linked oxidase domain-containing protein n=1 Tax=Nocardia brasiliensis ATCC 700358 RepID=K0F8G9_9NOCA
FAD-linked oxidase {ECO:0000313|EMBL:KFA92957.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystoba
FAD linked oxidase domain-containing protein
scnpilot_p_inoc_scaffold_589_27
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33074..35557)
DNA (2484bp) protein (828aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G5N2_SORC5 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN99052.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium ce
scnpilot_p_inoc_scaffold_589_28
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

35833..36765
DNA (933bp) protein (311aa)
Phospholipid/glycerol acyltransferase n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LZ00_HALO1
phospholipid/glycerol acyltransferase Tax=RBG_16_Acidobacteria_70_10_curated
phospholipid/glycerol acyltransferase
scnpilot_p_inoc_scaffold_589_29
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36758..38170
DNA (1413bp) protein (471aa)
sodium:dicarboxylate symporter n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00035E2840
Proton/glutamate symport protein {ECO:0000313|EMBL:AKF03688.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source
sodium:dicarboxylate symporter
scnpilot_p_inoc_scaffold_589_30
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38264..40006
DNA (1743bp) protein (581aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y0K8_SORCE rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGP37705.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
Displaying items 1-30 of 45 in total

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