ggKbase home page

scnpilot_p_inoc_scaffold_664

Search features with annotation key words

Displaying items 1-30 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_664_1
Thielaviopsis punctulata, Thielaviopsis, Microascales, Hypocreomycetidae, Ascomycota, Fungi

Not on your lists

comp(81..797)
DNA (717bp) protein (239aa)
hypothetical protein n=1 Tax=Streptomyces sp. AA0539 RepID=UPI0002DC7531
Uncharacterized protein {ECO:0000313|EMBL:KKA28040.1}; TaxID=72032 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Hypocreomycetidae; Microascales; Ceratocystidaceae;
MUC21; mucin 21, cell surface associated
scnpilot_p_inoc_scaffold_664_2
unknown

Not on your lists

1208..1579
DNA (372bp) protein (124aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_664_3
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1576..2691
DNA (1116bp) protein (372aa)
Transcriptional regulator, MerR family n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GX60_SORC5 rbh
TPR domain protein, putative component of TonB system {ECO:0000313|EMBL:EYF02482.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Ch
MerR family transcriptional regulator
scnpilot_p_inoc_scaffold_664_4
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2807..3589
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MLI0_CORCM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFE03807.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Cor
scnpilot_p_inoc_scaffold_664_5
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3733..4554)
DNA (822bp) protein (274aa)
Hydrolase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XLB0_SORCE rbh
Omega amidase {ECO:0000313|EMBL:EYF05260.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apicu
hydrolase
scnpilot_p_inoc_scaffold_664_6
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4579..5949
DNA (1371bp) protein (457aa)
Putative uncharacterized protein n=2 Tax=environmental samples RepID=C7FPC5_9BACT
RTX toxin {ECO:0000313|EMBL:AKF06837.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyt
scnpilot_p_inoc_scaffold_664_7
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5951..6967
DNA (1017bp) protein (339aa)
threonine dehydratase (EC:4.3.1.19)
Threonine dehydratase n=1 Tax=Leptolyngbya sp. PCC 6406 RepID=L8L8D8_9CYAN rbh
Threonine dehydratase {ECO:0000313|EMBL:EDP62320.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
scnpilot_p_inoc_scaffold_664_8
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6986..8821)
DNA (1836bp) protein (612aa)
Long-chain fatty acid--CoA ligase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XHP4_SORCE rbh
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:EYF08469.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source
long-chain fatty acid--CoA ligase rbh
scnpilot_p_inoc_scaffold_664_9
unknown

Not on your lists

comp(8889..9266)
DNA (378bp) protein (126aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_664_10
RBG_19FT_COMBO_Aminicenantes_58_17_curated, Aminicenantes, Bacteria

Not on your lists

9274..10575
DNA (1302bp) protein (434aa)
putative L-lysine 6-dehydrogenase Tax=RBG_19FT_COMBO_Aminicenantes_58_17_curated
putative L-lysine 6-dehydrogenase id=24580688 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate rbh
putative L-lysine 6-dehydrogenase
scnpilot_p_inoc_scaffold_664_11
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10707..12143
DNA (1437bp) protein (479aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000255|HAMAP-Rule:MF_01864}; EC=2.8.4.3 {ECO:0000255|HAMAP-Rule:MF_01864};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=MIAB_SORC5 rbh
hypothetical protein
scnpilot_p_inoc_scaffold_664_12
RLO_Deltaproteobacteria_40_28, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12143..12667
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FST5_SORC5
hexapeptide transferase family protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_40_28_curated
hypothetical protein
scnpilot_p_inoc_scaffold_664_13
unknown

Not on your lists

12781..13335
DNA (555bp) protein (185aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_664_14
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13364..13843)
DNA (480bp) protein (160aa)
Rare lipoprotein A n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LKG9_HALO1
lipoprotein A
Rare lipoprotein A {ECO:0000313|EMBL:ACY15017.1}; Flags: Precursor;; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" sour
scnpilot_p_inoc_scaffold_664_15
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14202..14855
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XX44_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP36926.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
scnpilot_p_inoc_scaffold_664_16
unknown

Not on your lists

14900..15715
DNA (816bp) protein (272aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_664_17
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15720..18227
DNA (2508bp) protein (836aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GSN0_SORC5 rbh
Uncharacterized protein {ECO:0000313|EMBL:EYF07801.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondrom
hypothetical protein
scnpilot_p_inoc_scaffold_664_18
CG_Elusi_04, Elusimicrobia, Bacteria

Not on your lists

18224..19411
DNA (1188bp) protein (396aa)
phospholipase D/transphosphatidylase; K06131 cardiolipin synthase [EC:2.7.8.-] Tax=CG_Elusi_04
Phospholipase D/Transphosphatidylase n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LFY9_HALO1
phospholipase D/transphosphatidylase
scnpilot_p_inoc_scaffold_664_19
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19411..20196
DNA (786bp) protein (262aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GV04_SORC5
1-acyl-sn-glycerol-3-phosphate acyltransferase
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000313|EMBL:CAN90687.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.
scnpilot_p_inoc_scaffold_664_20
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20221..20421)
DNA (201bp) protein (67aa)
Thiamine biosynthesis protein ThiS n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XZV3_SORCE
thiamine biosynthesis protein ThiS
Thiamine biosynthesis protein ThiS {ECO:0000313|EMBL:AGP38767.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="
scnpilot_p_inoc_scaffold_664_21
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


20494..21744
DNA (1251bp) protein (417aa)
Threonyl/alanyl tRNA synthetase n=2 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FJJ7_STIAD rbh
threonyl/alanyl tRNA synthetase
Threonyl/alanyl tRNA synthetase {ECO:0000313|EMBL:ADO71676.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" sou
scnpilot_p_inoc_scaffold_664_22
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21745..23190)
DNA (1446bp) protein (482aa)
Sigma-54 dependent DNA-binding response regulator n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GDS9_SORC5 rbh
sigma-54 dependent DNA-binding response regulator
Sigma-54 dependent DNA-binding response regulator {ECO:0000313|EMBL:CAN99395.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangi
scnpilot_p_inoc_scaffold_664_23
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23423..23980)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y9T2_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP42292.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
scnpilot_p_inoc_scaffold_664_24
unknown

Not on your lists

comp(24024..24512)
DNA (489bp) protein (163aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_664_25
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24522..24764)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YBR2_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP42294.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
scnpilot_p_inoc_scaffold_664_26
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25098..26090
DNA (993bp) protein (331aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B3CAAE
Uncharacterized protein {ECO:0000313|EMBL:AKF05687.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandara
hypothetical protein
scnpilot_p_inoc_scaffold_664_27
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26237..27364)
DNA (1128bp) protein (376aa)
Acyl-CoA dehydrogenase n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UB36_MYXSD
acyl-CoA dehydrogenase Tax=RBG_13_Deltaproteobacteria_43_22_curated
acyl-CoA dehydrogenase
scnpilot_p_inoc_scaffold_664_28
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27371..28615)
DNA (1245bp) protein (415aa)
Acyl-CoA dehydrogenase domain protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HV86_PARL1
acyl-CoA dehydrogenase domain-containing protein Tax=RBG_13_Deltaproteobacteria_43_22_curated
acyl-CoA dehydrogenase domain-containing protein
scnpilot_p_inoc_scaffold_664_29
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28653..29015)
DNA (363bp) protein (121aa)
Uncharacterized protein {ECO:0000313|EMBL:EYF00363.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondrom
hypothetical protein
RND family efflux transporter MFP subunit; K07798 Cu(I)/Ag(I) efflux system membrane protein CusB id=12557539 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
scnpilot_p_inoc_scaffold_664_30
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29082..29762
DNA (681bp) protein (227aa)
Dienelactone hydrolase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XHN2_SORCE
dienelactone hydrolase
Dienelactone hydrolase {ECO:0000313|EMBL:AGP32036.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium ce
Displaying items 1-30 of 63 in total

View Taxonomy